Investigation of transcription factor binding sequences and target genes using protein binding microarrays

Autor: Bolotin, Eugene Leonidovich.

Publikováno v: Uc access only.

Thesis (Ph. D.)--University of California, Riverside, 2010.
Includes abstract. Available via ProQuest Digital Dissertations. Title from first page of PDF file (viewed May 18, 2010). Includes bibliographical references. Also issued in print.

Externí odkaz: http://proquest.umi.com/pqdweb?index=0&did=2019822801&SrchMode=2&sid=3&Fmt=2&VInst=PROD&VType=PQD&RQT=309&VName=PQD&TS=1274203752&clientId=48051

Nuclear Receptor HNF4α Binding Sequences are Widespread in Alu Repeats

Autor: Bolotin Eugene, Chellappa Karthikeyani, Hwang-Verslues Wendy, Schnabl Jake M, Yang Chuhu, Sladek Frances M

Publikováno v: BMC Genomics, Vol 12, Iss 1, p 560 (2011)

Abstract Background Alu repeats, which account for ~10% of the human genome, were originally considered to be junk DNA. Recent studies, however, suggest that they may contain transcription factor binding sites and hence possibly play a role in regula

Externí odkaz: https://doaj.org/article/0f5b0eef777d428b8302e6648612dffd

The Transcription Factor Encyclopedia

Autor: Yusuf, Dimas, Butland, Stefanie L., Swanson, Magdalena I., Bolotin, Eugene, Ticoll, Amy, Cheung, Warren A., Zhang, Xiao Yu Cindy, Dickman, Christopher T. D., Fulton, Debra L., Lim, Jonathan S., Schnabl, Jake M., Ramos, Oscar H. P., Vasseur-Cognet, Mireille, de Leeuw, Charles N., Simpson, Elizabeth M., Ryffel, Gerhart U., Lam, Eric W.-F., Kist, Ralf, Wilson, Miranda S. C., Marco-Ferreres, Raquel, Brosens, Jan J., Beccari, Leonardo L., Bovolenta, Paola, Benayoun, Bérénice A., Monteiro, Lara J, Schwenen, Helma D C, Grontved, Lars, Wederell, Elizabeth, Mandrup, Susanne, Veitia, Reiner A, Chakravarthy, Harini, Hoodless, Pamela A., Mancarelli, M Michela, Torbett, Bruce E, Banham, Alison H, Reddy, Sekhar P, Cullum, Rebecca L, Liedtke, Michaela, Tschan, Mario P, Vaz, Michelle, Rizzino, Angie, Zannini, Mariastella, Frietze, Seth, Farnham, Peggy J, Eijkelenboom, Astrid, Brown, Philip J, Laperrière, David, Leprince, Dominique, de Cristofaro, Tiziana, Prince, Kelly L, Putker, Marrit, del Peso, Luis, Camenisch, Gieri, Wenger, Roland H, Mikula, Michal, Rozendaal, Marieke, Mader, Sylvie, Ostrowski, Jerzy, Rhodes, Simon J, Van Rechem, Capucine, Boulay, Gaylor, Olechnowicz, Sam W Z, Breslin, Mary B, Lan, Michael S, Nanan, Kyster K, Wegner, Michael, Hou, Juan, Mullen, Rachel D, Colvin, Stephanie C, Noy, Peter John, Webb, Carol F, Witek, Matthew E, Ferrell, Scott, Daniel, Juliet M, Park, Jason, Waldman, Scott A, Peet, Daniel J, Taggart, Michael, Jayaraman, Padma-Sheela, Karrich, Julien J, Blom, Bianca, Vesuna, Farhad, O'Geen, Henriette, Sun, Yunfu, Gronostajski, Richard M, Woodcroft, Mark W, Hough, Margaret R, Chen, Edwin, Europe-Finner, G Nicholas, Karolczak-Bayatti, Magdalena, Bailey, Jarrod, Hankinson, Oliver, Raman, Venu, LeBrun, David P, Biswal, Shyam, Harvey, Christopher J, DeBruyne, Jason P, Hogenesch, John B, Hevner, Robert F, Héligon, Christophe, Luo, Xin M, Blank, Marissa Cathleen, Millen, Kathleen Joyce, Sharlin, David S, Forrest, Douglas, Dahlman-Wright, Karin, Zhao, Chunyan, Mishima, Yuriko, Sinha, Satrajit, Chakrabarti, Rumela, Portales-Casamar, Elodie, Sladek, Frances M, Bradley, Philip H, Wasserman, Wyeth W, Cindy Zhang, Xiao

Publikováno v: Yusuf, D, Butland, S L, Swanson, M I, Bolotin, E, Ticoll, A, Cheung, W A, Zhang, X Y, Dickman, C T, Fulton, D L, Lim, J S, Schnabl, J M, Ramos, O H, Vasseur-Cognet, M, de Leeuw, C N, Simpson, E M, Ryffel, G U, Lam, E W-F, Kist, R, Wilson, M S, Marco-Ferreres, R, Brosens, J J, Beccari, L L, Bovolenta, P, Benayoun, B A, Monteiro, L J, Schwenen, H D, Grontved, L, Wederell, E, Mandrup, S, Veitia, R A, Chakravarthy, H, Hoodless, P A, Mancarelli, M, Torbett, B E, Banham, A H, Reddy, S P, Cullum, R L, Liedtke, M, Tschan, M P, Vaz, M, Rizzino, A, Zannini, M, Frietze, S, Farnham, P J, Eijkelenboom, A, Brown, P J, Laperriere, D, Leprince, D, de Cristofaro, T, Prince, K L, Putker, M, Del Peso, L, Camenisch, G, Wenger, R H, Mikula, M, Rozendaal, M, Mader, S, Ostrowski, J, Rhodes, S J, Van Rechem, C, Boulay, G, Olechnowicz, S W, Breslin, M B, Lan, M S, Nanan, K K, Wegner, M, Hou, J, Mullen, R D, Colvin, S C, Noy, P J, Webb, C F, Witek, M E, Ferrell, S, Daniel, J M, Park, J, Waldman, S A, Peet, D J, Taggart, M, Jayaraman, P-S, Karrich, J J, Blom, B, Vesuna, F, O'Geen, H, Sun, Y, Gronostajski, R M, Woodcroft, M W, Hough, M R, Chen, E, Europe-Finner, N, Karolczak-Bayatti, M, Bailey, J, Hankinson, O, Raman, V, Lebrun, D P, Biswal, S, Harvey, C J, Debruyne, J P, Hogenesch, J B, Hevner, R F, Heligon, C, Luo, X M, Blank, M C, Millen, K J, Sharlin, D S, Forrest, D, Dahlman-Wright, K, Zhao, C, Mishima, Y, Sinha, S, Chakrabarti, R, Portales-Casamar, E, Sladek, F M, Bradley, P H & Wasserman, W W 2012, ' The Transcription Factor Encyclopedia ', Genome Biology (Online Edition), vol. 13, no. 3, pp. R24 . https://doi.org/10.1186/gb-2012-13-3-r24
Genome biology (Online) (2012).
info:cnr-pdr/source/autori:Yusuf D, Butland SL, Swanson MI, Bolotin E, Ticoll A, Cheung WA, Zhang XY, Dickman CT, Fulton DL, Lim JS, Schnabl JM, Ramos OH, Vasseur-Cognet M, de Leeuw CN, Simpson EM, Ryffel GU, Lam EW, Kist R, Wilson MS, Marco-Ferreres R, Brosens JJ, Beccari LL, Bovolenta P, Benayoun BA, Monteiro LJ, Schwenen HD, Grontved L, Wederell E, Mandrup S, Veitia RA, Chakravarthy H, Hoodless PA, Mancarelli MM, Torbett BE, Banham AH, Reddy SP, Cullum RL, Liedtke M, Tschan MP, Vaz M, Rizzino A, Zannini M, Frietze S, Farnham PJ, Eijkelenboom A, Brown PJ, Laperrière D, Leprince D, de Cristofaro T, Prince KL, Putker M, del Peso L, Camenisch G, Wenger RH, Mikula M, Rozendaal M, Mader S, Ostrowski J, Rhodes SJ, Van Rechem C, Boulay G, Olechnowicz SW, Breslin MB, Lan MS, Nanan KK, Wegner M, Hou J, Mullen RD, Colvin SC, Noy PJ, Webb CF, Witek ME, Ferrell S, Daniel JM, Park J, Waldman SA, Peet DJ, Taggart M, Jayaraman PS, Karrich JJ, Blom B, Vesuna F, O'Geen H, Sun Y, Gronostajski RM, Woodcroft MW, Hough MR, Chen E, Europe-Finner GN, Karolczak-Bayatti M, Bailey J, Hankinson O, Raman V, LeBrun DP, Biswal S, Harvey CJ, DeBruyne JP, Hogenesch JB, Hevner RF, Héligon C, Luo XM, Blank MC, Millen KJ, Sharlin DS, Forrest D, Dahlman-Wright K, Zhao C, Mishima Y, Sinha S, Chakrabarti R, Portales-Casamar E, Sladek FM, Bradley PH, Wasserman WW./titolo:The transcription factor encyclopedia./doi:/rivista:Genome biology (Online)/anno:2012/pagina_da:/pagina_a:/intervallo_pagine:/volume
Digital.CSIC. Repositorio Institucional del CSIC
instname
Genome Biology
Genome Biology, 2012, 13 (3), pp.R24. ⟨10.1186/gb-2012-13-3-r24⟩
Yusuf, Dimas; Butland, Stefanie L; Swanson, Magdalena I; Bolotin, Eugene; Ticoll, Amy; Cheung, Warren A; et al.(2012). The Transcription Factor Encyclopedia. Genome Biology, 13(3), R24. doi: http://dx.doi.org/10.1186/gb-2012-13-3-r24. Retrieved from: http://www.escholarship.org/uc/item/1jt0p978
Yusuf, Dimas; Butland, Stefanie L; Swanson, Magdalena I; Bolotin, Eugene; Ticoll, Amy; Cheung, Warren A; Zhang, Xiao Yu Cindy; Dickman, Christopher T D; Fulton, Debra L; Lim, Jonathan S; Schnabl, Jake M; Ramos, Oscar H P; Vasseur-Cognet, Mireille; de Leeuw, Charles N; Simpson, Elizabeth M; Ryffel, Gerhart U; Lam, Eric W-F; Kist, Ralf; Wilson, Miranda S C; Marco-Ferreres, Raquel; ... (2012). The transcription factor encyclopedia. Genome biology, 13(3), R24. London: BioMed Central Ltd. 10.1186/gb-2012-13-3-r24
Genome Biology, BioMed Central, 2012, 13 (3), pp.R24. 〈10.1186/gb-2012-13-3-r24〉
Biblos-e Archivo. Repositorio Institucional de la UAM
Genome Biology, BioMed Central, 2012, 13 (3), pp.R24. ⟨10.1186/gb-2012-13-3-r24⟩
Genome biology, 13(3). BioMed Central

Here we present the Transcription Factor Encyclopedia (TFe), a new web-based compendium of mini review articles on transcription factors (TFs) that is founded on the principles of open access and collaboration. Our consortium of over 100 researchers

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9c3fe31095d5f72672d0f3c170027c9e
https://hal.archives-ouvertes.fr/inserm-00716041/document

Investigation of Transcription Factor Binding Sequences and Target Genes using Protein Binding Microarrays

Autor: Bolotin, Eugene Leonidovich

Publikováno v: Bolotin, Eugene Leonidovich. (2010). Investigation of Transcription Factor Binding Sequences and Target Genes using Protein Binding Microarrays. UC Riverside: Cell, Molecular and Developmental Biology. Retrieved from: http://www.escholarship.org/uc/item/93w8f6sj

This thesis describes the investigation of binding rules and DNA binding sequences for several transcription factors (TFs). We develop Protein Binding Microarrays (PBMs) to study the interactions between TFs and in vitro and we use a support vector m

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______325::eae95e9645f3765effde1212c475ce3f
http://n2t.net/ark:/13030/m5t156gt

Tento výsledek nelze pro nepřihlášené uživatele zobrazit.
K zobrazení výsledku je třeba se přihlásit.