Zobrazeno 1 - 10
of 5 215
pro vyhledávání: '"Bolhuis, P"'
We study rare transitions in Markovian open quantum systems driven with Gaussian noise, applying transition path and interface sampling methods to trajectories generated by stochastic Schr\"odinger dynamics. Interface and path sampling offer insights
Externí odkaz:
http://arxiv.org/abs/2411.00490
Autor:
Falkner, Sebastian, Coretti, Alessandro, Peters, Baron, Bolhuis, Peter G., Dellago, Christoph
Rare event sampling algorithms are essential for understanding processes that occur infrequently on the molecular scale, yet they are important for the long-time dynamics of complex molecular systems. One of these algorithms, transition path sampling
Externí odkaz:
http://arxiv.org/abs/2408.03054
Autor:
Inonge Reimert, J. Elizabeth Bolhuis
Publikováno v:
Scientific Reports, Vol 14, Iss 1, Pp 1-8 (2024)
Abstract Emotional contagion can be defined as the transfer of an emotional state from the demonstrator of that state towards an observer. Social buffering is a process by which the demonstrator has a reduced stress response due to the presence of on
Externí odkaz:
https://doaj.org/article/601f5094578b49efabef9c4a1a44fee0
Autor:
Gonçalo J. Piedade, Max E. Schön, Cédric Lood, Mikhail V. Fofanov, Ella M. Wesdorp, Tristan E. G. Biggs, Lingyi Wu, Henk Bolhuis, Matthias G. Fischer, Natalya Yutin, Bas E. Dutilh, Corina P. D. Brussaard
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-16 (2024)
Abstract The Southern Ocean microbial ecosystem, with its pronounced seasonal shifts, is vulnerable to the impacts of climate change. Since viruses are key modulators of microbial abundance, diversity, and evolution, we need a better understanding of
Externí odkaz:
https://doaj.org/article/8471e7ae01284101937f55785af93dc9
Autor:
Iris van ’t Erve, Bahar Alipanahi, Keith Lumbard, Zachary L. Skidmore, Lorenzo Rinaldi, Laurel K. Millberg, Jacob Carey, Bryan Chesnick, Stephen Cristiano, Carter Portwood, Tony Wu, Erica Peters, Karen Bolhuis, Cornelis J. A. Punt, Jennifer Tom, Peter B. Bach, Nicholas C. Dracopoli, Gerrit A. Meijer, Robert B. Scharpf, Victor E. Velculescu, Remond J. A. Fijneman, Alessandro Leal
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-12 (2024)
Abstract Circulating cell-free DNA (cfDNA) assays for monitoring individuals with cancer typically rely on prior identification of tumor-specific mutations. Here, we develop a tumor-independent and mutation-independent approach (DELFI-tumor fraction,
Externí odkaz:
https://doaj.org/article/8005c4ee68144cd383ff212f1b67d00a
Molecular dynamics is a powerful tool for studying the thermodynamics and kinetics of complex molecular events. However, these simulations can rarely sample the required time scales in practice. Transition path sampling overcomes this limitation by c
Externí odkaz:
http://arxiv.org/abs/2307.11240
Publikováno v:
J. Chem. Phys. 160, 024108 2024
Simulations of condensed matter systems often focus on the dynamics of a few distinguished components but require integrating the dynamics of the full system. A prime example is a molecular dynamics simulation of a (macro)molecule in solution, where
Externí odkaz:
http://arxiv.org/abs/2306.17672
Publikováno v:
Scientific Reports, Vol 14, Iss 1, Pp 1-9 (2024)
Abstract Childhood bereavement is an adverse event, yet children demonstrate considerable variability in health outcomes. Bereaved children are at risk of lower lifelong educational attainment, though the contribution of neurocognitive performance is
Externí odkaz:
https://doaj.org/article/13d270135e7f4069aff0491d1a53bfd6
Publikováno v:
Frontiers in Ecology and Evolution, Vol 12 (2024)
Externí odkaz:
https://doaj.org/article/45deb978fe57406b8b9f1638056e130c
Publikováno v:
mLife, Vol 3, Iss 2, Pp 163-166 (2024)
Externí odkaz:
https://doaj.org/article/7c4928f31e82436ba62c3f87f86f5368