Zobrazeno 1 - 10
of 193
pro vyhledávání: '"Bobbie Jo M Webb-Robertson"'
Autor:
Marjolein Oostrom, Michael A Muniak, Rogene M Eichler West, Sarah Akers, Paritosh Pande, Moses Obiri, Wei Wang, Kasey Bowyer, Zhuhao Wu, Lisa M Bramer, Tianyi Mao, Bobbie Jo M Webb-Robertson
Publikováno v:
PLoS ONE, Vol 19, Iss 3, p e0293856 (2024)
Light-sheet microscopy has made possible the 3D imaging of both fixed and live biological tissue, with samples as large as the entire mouse brain. However, segmentation and quantification of that data remains a time-consuming manual undertaking. Mach
Externí odkaz:
https://doaj.org/article/89c2b715a19448aeb61a8a9ccb5ee256
Autor:
Kyle R. Pomraning, Ziyu Dai, Nathalie Munoz, Young-Mo Kim, Yuqian Gao, Shuang Deng, Teresa Lemmon, Marie S. Swita, Jeremy D. Zucker, Joonhoon Kim, Stephen J. Mondo, Ellen Panisko, Meagan C. Burnet, Bobbie-Jo M. Webb-Robertson, Beth Hofstad, Scott E. Baker, Kristin E. Burnum-Johnson, Jon K. Magnuson
Publikováno v:
Metabolic Engineering Communications, Vol 15, Iss , Pp e00203- (2022)
The global regulator LaeA controls secondary metabolism in diverse Aspergillus species. Here we explored its role in regulation of itaconic acid production in Aspergillus pseudoterreus. To understand its role in regulating metabolism, we deleted and
Externí odkaz:
https://doaj.org/article/c82712619c0643e8aca4916f9a4abde9
Autor:
James Kirby, Gina M. Geiselman, Junko Yaegashi, Joonhoon Kim, Xun Zhuang, Mary Bao Tran-Gyamfi, Jan-Philip Prahl, Eric R. Sundstrom, Yuqian Gao, Nathalie Munoz, Kristin E. Burnum-Johnson, Veronica T. Benites, Edward E. K. Baidoo, Anna Fuhrmann, Katharina Seibel, Bobbie-Jo M. Webb-Robertson, Jeremy Zucker, Carrie D. Nicora, Deepti Tanjore, Jon K. Magnuson, Jeffrey M. Skerker, John M. Gladden
Publikováno v:
Biotechnology for Biofuels, Vol 14, Iss 1, Pp 1-16 (2021)
Abstract Background Mitigation of climate change requires that new routes for the production of fuels and chemicals be as oil-independent as possible. The microbial conversion of lignocellulosic feedstocks into terpene-based biofuels and bioproducts
Externí odkaz:
https://doaj.org/article/5fb8c4d5c0ec4ab18b6c3bedeb372fe2
Autor:
Jennifer E. Kyle, Kelly G. Stratton, Erika M. Zink, Young-Mo Kim, Kent J. Bloodsworth, Matthew E. Monroe, Undiagnosed Diseases Network, Katrina M. Waters, Bobbie-Jo M. Webb-Robertson, David M. Koeller, Thomas O. Metz
Publikováno v:
Scientific Data, Vol 8, Iss 1, Pp 1-12 (2021)
Measurement(s) Metabolomics • Lipidomics Technology Type(s) gas chromatography-mass spectrometry • Ultra High-performance Liquid Chromatography/Tandem Mass Spectrometry Factor Type(s) age group • sex Sample Characteristic - Organism Homo sapien
Externí odkaz:
https://doaj.org/article/a1a3fddd0f3d490385d18b1f8e290ad7
Autor:
Marija Veličković, Ruonan Wu, Yuqian Gao, Margaret W Thairu, Dušan Veličković, Nathalie Munoz, Chaevien S Clendinen, Aivett Bibao, Rosalie K Chu, Priscila M Lalli, Kevin Zemaitis, Carrie D Nicora, Jennifer E Kyle, Daniel Orton, Sarai Williams, Ying Zhu, Rui Zhao, Lisa M Bramer, Matthew E Monroe, Ronald J Moore, Bobbie-Jo M Webb-Robertson, Cameron R Currie, Paul D Piehowski, Kristin E Burnum-Johnson
The annotated protein database was curated to annotate MS/MS data in the manuscript titled 'Mapping Microhabitats: Metabolome Informed Proteome Imaging of Lignocellulose Decomposition by a Naturally Evolved Microbial Consortium'. 
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7c274f7d2265ee78360a0c6a674c578b
Autor:
Maikel L. Colli, Mireia Ramos-Rodríguez, Ernesto S. Nakayasu, Maria I. Alvelos, Miguel Lopes, Jessica L. E. Hill, Jean-Valery Turatsinze, Alexandra Coomans de Brachène, Mark A. Russell, Helena Raurell-Vila, Angela Castela, Jonàs Juan-Mateu, Bobbie-Jo M. Webb-Robertson, Lars Krogvold, Knut Dahl-Jorgensen, Lorella Marselli, Piero Marchetti, Sarah J. Richardson, Noel G. Morgan, Thomas O. Metz, Lorenzo Pasquali, Décio L. Eizirik
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-17 (2020)
The cytokine IFNα is expressed in the islets of individuals with type 1 diabetes and contributes to local inflammation and destruction of beta cells. Here, the authors provide a global multiomics view of IFNα-induced changes in human beta cells at
Externí odkaz:
https://doaj.org/article/7ba57ffc94954c2897c0cf413d87e02a
Autor:
Paul D. Piehowski, Ying Zhu, Lisa M. Bramer, Kelly G. Stratton, Rui Zhao, Daniel J. Orton, Ronald J. Moore, Jia Yuan, Hugh D. Mitchell, Yuqian Gao, Bobbie-Jo M. Webb-Robertson, Sudhansu K. Dey, Ryan T. Kelly, Kristin E. Burnum-Johnson
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020)
Imaging mass spectrometry is a powerful emerging tool for mapping the spatial distribution of biomolecules across tissue surfaces. Here the authors showcase an automated technology for deep proteome imaging that utilizes ultrasensitive microfluidics
Externí odkaz:
https://doaj.org/article/e3b5a3a1d7b147dd83097e22370e56dc
Autor:
Lily Khadempour, Jennifer E. Kyle, Bobbie-Jo M. Webb-Robertson, Carrie D. Nicora, Francesca B. Smith, Richard D. Smith, Mary S. Lipton, Cameron R. Currie, Erin S. Baker, Kristin E. Burnum-Johnson
Publikováno v:
mSystems, Vol 6, Iss 2 (2021)
ABSTRACT Lipids are essential to all living organisms, as an energy source, as an important cellular structural component, and as a communication tool. In this study, we used global lipidomic methods to evaluate the lipids in leaf-cutter ant fungal g
Externí odkaz:
https://doaj.org/article/61e33b57bcb6482fabfb96e3acb09baf
Autor:
Kyle R. Pomraning, Ziyu Dai, Nathalie Munoz, Young-Mo Kim, Yuqian Gao, Shuang Deng, Joonhoon Kim, Beth A. Hofstad, Marie S. Swita, Teresa Lemmon, James R. Collett, Ellen A. Panisko, Bobbie-Jo M. Webb-Robertson, Jeremy D. Zucker, Carrie D. Nicora, Henrique De Paoli, Scott E. Baker, Kristin E. Burnum-Johnson, Nathan J. Hillson, Jon K. Magnuson
Publikováno v:
Frontiers in Bioengineering and Biotechnology, Vol 9 (2021)
Biological engineering of microorganisms to produce value-added chemicals is a promising route to sustainable manufacturing. However, overproduction of metabolic intermediates at high titer, rate, and yield from inexpensive substrates is challenging
Externí odkaz:
https://doaj.org/article/0ffca279396d4456b27cf621f04488ae
Autor:
Yuqian Gao, Thomas L. Fillmore, Nathalie Munoz, Gayle J. Bentley, Christopher W. Johnson, Joonhoon Kim, Jamie A. Meadows, Jeremy D. Zucker, Meagan C. Burnet, Anna K. Lipton, Aivett Bilbao, Daniel J. Orton, Young-Mo Kim, Ronald J. Moore, Errol W. Robinson, Scott E. Baker, Bobbie-Jo M. Webb-Robertson, Adam M. Guss, John M. Gladden, Gregg T. Beckham, Jon K. Magnuson, Kristin E. Burnum-Johnson
Publikováno v:
Frontiers in Bioengineering and Biotechnology, Vol 8 (2020)
Targeted proteomics is a mass spectrometry-based protein quantification technique with high sensitivity, accuracy, and reproducibility. As a key component in the multi-omics toolbox of systems biology, targeted liquid chromatography-selected reaction
Externí odkaz:
https://doaj.org/article/564acf3201ee4f20834e31449a0a2d8d