Dissecting the loci underlying maturation timing in Atlantic salmon using haplotype and multi-SNP based association methods

Autor: Marion Sinclair-Waters, Torfinn Nome, Jing Wang, Sigbjørn Lien, Matthew P. Kent, Harald Sægrov, Bjørn Florø-Larsen, Geir H. Bolstad, Craig R. Primmer, Nicola J. Barson

Publikováno v: Heredity

Characterizing the role of different mutational effect sizes in the evolution of fitness-related traits has been a major goal in evolutionary biology for a century. Such characterization in a diversity of systems, both model and non-model, will help

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5c28042eef9359e2f3dac36e6705031b
https://hdl.handle.net/11250/3036841

Domesticated escapees on the run: the second-generation monitoring programme reports the numbers and proportions of farmed Atlantic salmon in >200 Norwegian rivers annually

Autor: Helge Skoglund, Bjørn Torgeir Barlaup, Bjørn Florø-Larsen, Ingrid Solberg, Sten Karlsson, Peder Fiske, Kurt Urdal, Harald Sægrov, Gunnar O Bakke, Kevin A. Glover, Monica Favnebøe Solberg, Ola Håvard Diserud, Øystein Skaala, Tonje Aronsen, Håkon Otterå, Ove Skilbrei, Kjetil Hindar, Mikko Heino, Anders Lamberg, Øyvind Kanstad-Hanssen, Rune Muladal, Tor F. Næsje, Vidar Wennevik, Håvard Lo

Publikováno v: ICES Journal of Marine Science

Norway is the world’s largest producer of farmed Atlantic salmon and is home to ∼400 rivers containing wild salmon populations. Farmed escapees, a reoccurring challenge of all cage-based marine aquaculture, pose a threat to the genetic integrity,

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5965440ace23098b7e9aecbee224a398
https://doi.org/10.1093/icesjms/fsy207

The structural variation landscape in 492 Atlantic salmon genomes

Autor: Craig R. Primmer, Sigbjørn Lien, Kjetil Hindar, Samuel A.M. Martin, Manu Kumar Gundappa, Matilde Mengkrog Holen, Line Lieblein Røsæg, Ian Johnston, Alicia C. Bertolotti, Ege Pehlivanoglu, Diego Robledo, Harald Sægrov, Teshome Dagne Mulugeta, Daniel J. Macqueen, Torfinn Nome, Simen Rød Sandve, Bjørn Florø-Larsen, Thomas J. Ashton, Matthew Peter Kent, Jaakko Erkinaro, Ryan M. Layer, Louis Bernatchez, Michael Gallagher

Publikováno v: Nature Communications
Nature Communications, Vol 11, Iss 1, Pp 1-16 (2020)
Bertolotti, A, Layer, R M, Gundappa, M K, Gallagher, M, Pehlivanoglu, E, Nome, T, Robledo, D, Kent, M P, Røsæg, L L, Holen, M M, Mulugeta, T D, Ashton, T J, Hindar, K, Saegrov, H, Florø-Larsen, B, Erkinaro, J, Primmer, C R, Bernatchez, L, Martin, S A M, Johnston, I A, Sandve, S R, Lien, S & Macqueen, D 2020, ' The structural variation landscape in 492 Atlantic salmon genomes ', Nature Communications, vol. 11, 5176 (2020) . https://doi.org/10.1038/s41467-020-18972-x

Structural variants (SVs) are a major source of genetic and phenotypic variation, but remain challenging to accurately type and are hence poorly characterized in most species. We present an approach for reliable SV discovery in non-model species usin

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::41225293028e0f134b7dd3ff57c8296e
https://pubmed.ncbi.nlm.nih.gov/33056985

Gene flow from domesticated escapes alters the life history of wild Atlantic salmon

Autor: Eero Niemelä, Geir H. Bolstad, Harald Sægrov, Ola Håvard Diserud, Bjørn Torgeir Barlaup, Peder Fiske, Arne Jensen, Sten Karlsson, Kurt Urdal, Håvard Lo, Grethe Robertsen, Kjetil Hindar, Bror Jonsson, Tor F. Næsje, Bjørn Florø-Larsen

Publikováno v: Nature Ecology & Evolution

Interbreeding between domesticated and wild animals occurs in several species. This gene flow has long been anticipated to induce genetic changes in life-history traits of wild populations, thereby influencing population dynamics and viability. Here,

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::826fbbb23374b28fddeb4bcd2e614a16
https://pubmed.ncbi.nlm.nih.gov/28812692