Zobrazeno 1 - 10
of 51
pro vyhledávání: '"Benli Chai"'
Autor:
Yuhao Fu, Qingyuan Dou, Kornelia Smalla, Yu Wang, Timothy A. Johnson, Kristian K. Brandt, Zhi Mei, Maoyuan Liao, Syed A. Hashsham, Andreas Schäffer, Hauke Smidt, Tong Zhang, Hui Li, Robert Stedtfeld, Hongjie Sheng, Benli Chai, Marko Virta, Xin Jiang, Fang Wang, Yong‐Guan Zhu, James M. Tiedje
Publikováno v:
mLife, Vol 2, Iss 4, Pp 350-364 (2023)
Abstract The emergence and rapid spread of antimicrobial resistance is of global public health concern. The gut microbiota harboring diverse commensal and opportunistic bacteria that can acquire resistance via horizontal and vertical gene transfers i
Externí odkaz:
https://doaj.org/article/937af0719be049469640f99e188805a3
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-13 (2021)
Abstract Background Soil is an important reservoir of antibiotic resistance genes (ARGs), but their potential risk in different ecosystems as well as response to anthropogenic land use change is unknown. We used a metagenomic approach and datasets wi
Externí odkaz:
https://doaj.org/article/2d1eb473832e4f03b24001c39f512ead
Autor:
Francesca Bennato, Camillo Martino, Marco Di Domenico, Andrea Ianni, Benli Chai, Lisa Di Marcantonio, Cesare Cammà, Giuseppe Martino
Publikováno v:
Veterinary Sciences, Vol 9, Iss 9, p 452 (2022)
The accumulation and disposal of by-products deriving from the agro-food industry represents a problem both from an economic and environmental point of view. The use of these matrices in zootechnical nutrition could represent a feasible solution. The
Externí odkaz:
https://doaj.org/article/23b4c44e987d4ee0a5f8db63c0552a7f
Autor:
Robert D. Stedtfeld, Benli Chai, Robert B. Crawford, Tiffany M. Stedtfeld, Maggie R. Williams, Shao Xiangwen, Tomomi Kuwahara, James R. Cole, Norbert E. Kaminski, James M. Tiedje, Syed A. Hashsham
Publikováno v:
Frontiers in Microbiology, Vol 8 (2017)
Environmental toxicants such as 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD), an aryl hydrocarbon receptor (AhR), are known to induce host toxicity and structural shifts in the gut microbiota. Key bacterial populations with similar or opposing function
Externí odkaz:
https://doaj.org/article/79683224aaae476997103cbe375fdcec
Autor:
Benli Chai, Tamara V Tsoi, Shoko Iwai, Cun Liu, Jordan A Fish, Cheng Gu, Timothy A Johnson, Gerben Zylstra, Brian J Teppen, Hui Li, Syed A Hashsham, Stephen A Boyd, James R Cole, James M Tiedje
Publikováno v:
PLoS ONE, Vol 11, Iss 6, p e0157008 (2016)
Sphingomonas wittichii strain RW1 (RW1) is one of the few strains that can grow on dibenzo-p-dioxin (DD). We conducted a transcriptomic study of RW1 using RNA-Seq to outline transcriptional responses to DD, dibenzofuran (DF), and the smectite clay mi
Externí odkaz:
https://doaj.org/article/1d1a69e482404efda35b07a4f2486174
Publikováno v:
PLoS ONE, Vol 11, Iss 6, p e0156993 (2016)
In order to identify genetic components in flowering pathways of highbush blueberry (Vaccinium corymbosum L.), a transcriptome reference composed of 254,396 transcripts and 179,853 gene contigs was developed by assembly of 72.7 million reads using Tr
Externí odkaz:
https://doaj.org/article/4ab6570afb9249fda9a86f666b3372c2
Publikováno v:
Microbiome
Microbiome, Vol 9, Iss 1, Pp 1-13 (2021)
Microbiome, Vol 9, Iss 1, Pp 1-13 (2021)
Background Soil is an important reservoir of antibiotic resistance genes (ARGs), but their potential risk in different ecosystems as well as response to anthropogenic land use change is unknown. We used a metagenomic approach and datasets with well-c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2a779dfc1193a900f624fe72b9fa6343
https://doi.org/10.1186/s40168-021-01047-4
https://doi.org/10.1186/s40168-021-01047-4
Autor:
Qian, Xun, Gunturu, Santosh, Jiarong Guo, Benli Chai, Cole, James R., Gu, Jie, Tiedje, James M.
Additional file 1: Table S1. Statistics of de novo assemblies and ARG-carrying contigs. Fig. S1. Geographical distribution of sampling sites. Fig. S2. Antibiotic resistance regulatory genes in soils with arlR, cpxR, ompR, vanR and vanS found in all 2
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::98347d1cf1da52ff17cc841c6e705b71
Autor:
Feifei Liu, Ye Deng, Juan Li, Kai Feng, Michael D. Weiser, Benli Chai, Jordan G. Okie, Zhili He, Daliang Ning, Shouwen Chen, Bo Wu, Lina Shen, Jizhong Zhou, Liyou Wu
Publikováno v:
Functional Ecology. 32:1867-1878
Author(s): Wu, B; Liu, F; Weiser, MD; Ning, D; Okie, JG; Shen, L; Li, J; Chai, B; Deng, Y; Feng, K; Wu, L; Chen, S; Zhou, J; He, Z | Abstract: Micro-organisms harbouring the nosZ gene convert N2O to N2 and play a critical role in reducing global N2O
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::dcc1368538feb6214fa58ba8cb977639
https://doi.org/10.1111/1365-2435.13091
https://doi.org/10.1111/1365-2435.13091
Autor:
Tong Zhang, Li-Guan Li, Xiao-Tao Jiang, Benli Chai, Ying Yang, James M. Tiedje, James R. Cole, Xiaole Yin
Publikováno v:
Bioinformatics. 34:2263-2270
Motivation Much global attention has been paid to antibiotic resistance in monitoring its emergence, accumulation and dissemination. For rapid characterization and quantification of antibiotic resistance genes (ARGs) in metagenomic datasets, an onlin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0abf18858a492525efb8768da5e4e473
https://doi.org/10.1093/bioinformatics/bty053
https://doi.org/10.1093/bioinformatics/bty053