Patch spaces and fusion strategies in patch-based label fusion

Autor: Benkarim OM, Piella G, Hahner N, Eixarch E, González Ballester MA, Sanroma G

Publikováno v: COMPUT MED IMAG GRAP
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Fundació Sant Joan de Déu
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In the field of multi-atlas segmentation, patch-based approaches have shown promising results in the segmentation of biomedical images. In the most common approach, registration is used to warp the atlases to the target space and then the warped atla

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::1102d3eb80c762d1ff4dd7a4ceef9338
http://fundanet.fsjd.org/Publicaciones/ProdCientif/PublicacionFrw.aspx?id=15477

Cortical folding alterations in fetuses with isolated non-severe ventriculomegaly

Autor: Benkarim OM, Hahner N, Piella G, Gratacós E, Gonzalez Ballester MA, Eixarch E, Sanroma G

Publikováno v: NEUROIMAGE-CLINICAL
r-FSJD. Repositorio Institucional de Producción Científica de la Fundació Sant Joan de Déu
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r-FSJD: Repositorio Institucional de Producción Científica de la Fundació Sant Joan de Déu
Fundació Sant Joan de Déu

Neuroimaging of brain diseases plays a crucial role in understanding brain abnormalities and early diagnosis. Of great importance is the study of brain abnormalities in utero and the assessment of deviations in case of maldevelopment. In this work, b

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::2cccad9eb1556381dca3f726ccd6522b
http://fundanet.fsjd.org/Publicaciones/ProdCientif/PublicacionFrw.aspx?id=13543

Global and Regional Changes in Cortical Development Assessed by MRI in Fetuses with Isolated Nonsevere Ventriculomegaly Correlate with Neonatal Neurobehavior.

Autor: Hahner N; From the Fetal i+D Fetal Medicine Research Center (N.H., M.P.-C., E.G., E.E.), BCNatal-Barcelona Center for Maternal-Fetal and Neonatal Medicine (Hospital Clínic and Hospital Sant Joan de Déu), Institut Clínic de Ginecologia, Obstetricia i Neonatologia, Institut d'Investigacions Biomèdiques August Pi i Sunyer, Universitat de Barcelona, Barcelona, Spain., Benkarim OM; BCN MedTech (O.M.B., G.P., G.S., M.A.G.B.), Universitat Pompeu Fabra, Barcelona, Spain., Aertsen M; Departments of Radiology (M.A.)., Perez-Cruz M; From the Fetal i+D Fetal Medicine Research Center (N.H., M.P.-C., E.G., E.E.), BCNatal-Barcelona Center for Maternal-Fetal and Neonatal Medicine (Hospital Clínic and Hospital Sant Joan de Déu), Institut Clínic de Ginecologia, Obstetricia i Neonatologia, Institut d'Investigacions Biomèdiques August Pi i Sunyer, Universitat de Barcelona, Barcelona, Spain., Piella G; BCN MedTech (O.M.B., G.P., G.S., M.A.G.B.), Universitat Pompeu Fabra, Barcelona, Spain., Sanroma G; BCN MedTech (O.M.B., G.P., G.S., M.A.G.B.), Universitat Pompeu Fabra, Barcelona, Spain., Bargallo N; Magnetic Resonance Image Core Facility (N.B.), Institut d'Investigacions Biomediques August Pi i Sunyer, Barcelona, Spain.; Department of Radiology (N.B.), Centre de Diagnòstic per la Imatge, Hospital Clínic, Barcelona, Spain., Deprest J; Obstetrics (J.D.), UZ Leuven, Leuven, Belgium.; Institute for Women's Health (J.D.), University College London, London, UK., Gonzalez Ballester MA; BCN MedTech (O.M.B., G.P., G.S., M.A.G.B.), Universitat Pompeu Fabra, Barcelona, Spain.; ICREA (M.A.G.B.), Barcelona, Spain., Gratacos E; From the Fetal i+D Fetal Medicine Research Center (N.H., M.P.-C., E.G., E.E.), BCNatal-Barcelona Center for Maternal-Fetal and Neonatal Medicine (Hospital Clínic and Hospital Sant Joan de Déu), Institut Clínic de Ginecologia, Obstetricia i Neonatologia, Institut d'Investigacions Biomèdiques August Pi i Sunyer, Universitat de Barcelona, Barcelona, Spain gratacos@clinic.cat.; Centre for Biomedical Research on Rare Diseases (E.G., E.E.), Barcelona, Spain., Eixarch E; From the Fetal i+D Fetal Medicine Research Center (N.H., M.P.-C., E.G., E.E.), BCNatal-Barcelona Center for Maternal-Fetal and Neonatal Medicine (Hospital Clínic and Hospital Sant Joan de Déu), Institut Clínic de Ginecologia, Obstetricia i Neonatologia, Institut d'Investigacions Biomèdiques August Pi i Sunyer, Universitat de Barcelona, Barcelona, Spain.; Centre for Biomedical Research on Rare Diseases (E.G., E.E.), Barcelona, Spain.

Publikováno v: AJNR. American journal of neuroradiology [AJNR Am J Neuroradiol] 2019 Sep; Vol. 40 (9), pp. 1567-1574.

Revealing Regional Associations of Cortical Folding Alterations with In Utero Ventricular Dilation Using Joint Spectral Embedding.

Autor: Benkarim OM; BCN Medtech, Universitat Pompeu Fabra, Barcelona, Spain., Sanroma G; Deutsche Zentrum für Neurodegenerative Erkrankungen (DZNE), Bonn, Germany., Piella G; BCN Medtech, Universitat Pompeu Fabra, Barcelona, Spain., Rekik I; BASIRA lab, CVIP group, School of Science and Engineering, Computing, University of Dundee, UK., Hahner N; BCNatal, Hospital Clínic and Hospital Sant Joan de Déu, Barcelona, Spain., Eixarch E; BCNatal, Hospital Clínic and Hospital Sant Joan de Déu, Barcelona, Spain., Gonzélez Ballester MA; BCN Medtech, Universitat Pompeu Fabra, Barcelona, Spain.; ICREA, Barcelona, Spain., Shen D; Department of Radiology and BRIC, University of North Carolina at Chapel Hill, NC, USA., Li G; Department of Radiology and BRIC, University of North Carolina at Chapel Hill, NC, USA.

Publikováno v: Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention [Med Image Comput Comput Assist Interv] 2018 Sep; Vol. 11072, pp. 620-627. Date of Electronic Publication: 2018 Sep 13.

Learning non-linear patch embeddings with neural networks for label fusion.

Autor: Sanroma G; Department of Information and Communication Technologies, Universitat Pompeu Fabra, Tànger 122-140, Barcelona 08018, Spain. Electronic address: gerard.sanroma@upf.edu., Benkarim OM; Department of Information and Communication Technologies, Universitat Pompeu Fabra, Tànger 122-140, Barcelona 08018, Spain., Piella G; Department of Information and Communication Technologies, Universitat Pompeu Fabra, Tànger 122-140, Barcelona 08018, Spain., Camara O; Department of Information and Communication Technologies, Universitat Pompeu Fabra, Tànger 122-140, Barcelona 08018, Spain., Wu G; Department of Radiology and BRIC, University of North Carolina at Chapel Hill, 102 Mason Farm Rd., NC 27599, USA., Shen D; Department of Radiology and BRIC, University of North Carolina at Chapel Hill, 102 Mason Farm Rd., NC 27599, USA; Department of Brain and Cognitive Engineering, Korea University, Seoul, Republic of Korea., Gispert JD; Barcelonaβeta Brain Research Center, Pasqual Maragall Foundation, Wellington 30, Barcelona 08005 Spain., Molinuevo JL; Barcelonaβeta Brain Research Center, Pasqual Maragall Foundation, Wellington 30, Barcelona 08005 Spain., González Ballester MA; Department of Information and Communication Technologies, Universitat Pompeu Fabra, Tànger 122-140, Barcelona 08018, Spain; ICREA, Pg. Lluis Companys 23, Barcelona 08010 Spain.

Publikováno v: Medical image analysis [Med Image Anal] 2018 Feb; Vol. 44, pp. 143-155. Date of Electronic Publication: 2017 Dec 02.