Zobrazeno 1 - 10
of 30
pro vyhledávání: '"Benjamin Linard"'
Autor:
Carmelo Andújar, Paula Arribas, Michal Motyka, Mathew Bocek, Ladislav Bocak, Benjamin Linard, Alfried P. Vogler
Publikováno v:
Mitochondrial DNA. Part B. Resources, Vol 4, Iss 2, Pp 2447-2450 (2019)
High-throughput DNA methods hold great promise for the study of the hyperdiverse arthropod fauna of the soil. We used the mitochondrial metagenomic approach to generate 39 mitochondrial genomes from adult and larval specimens of Coleoptera collected
Externí odkaz:
https://doaj.org/article/ccbf2b4294d94aa98891f15c8dc53180
Autor:
Débora P Paula, Benjamin Linard, Alex Crampton-Platt, Amrita Srivathsan, Martijn J T N Timmermans, Edison R Sujii, Carmen S S Pires, Lucas M Souza, David A Andow, Alfried P Vogler
Publikováno v:
PLoS ONE, Vol 11, Iss 9, p e0161841 (2016)
Characterizing trophic networks is fundamental to many questions in ecology, but this typically requires painstaking efforts, especially to identify the diet of small generalist predators. Several attempts have been devoted to develop suitable molecu
Externí odkaz:
https://doaj.org/article/79627d2c2a9948e28ef0d3a3f22421ec
Publikováno v:
Evolutionary Bioinformatics, Vol 2012, Iss 8, Pp 61-77 (2011)
Externí odkaz:
https://doaj.org/article/37d36c39a92f40908009650c6d4bf9e9
Publikováno v:
Evolutionary Bioinformatics, Vol 8 (2012)
Evolutionary systems biology aims to uncover the general trends and principles governing the evolution of biological networks. An essential part of this process is the reconstruction and analysis of the evolutionary histories of these complex, dynami
Externí odkaz:
https://doaj.org/article/0b6aa8bf2a50496591687f88237ce945
Publikováno v:
PLoS ONE, Vol 6, Iss 3, p e18093 (2011)
Multiple comparison or alignmentof protein sequences has become a fundamental tool in many different domains in modern molecular biology, from evolutionary studies to prediction of 2D/3D structure, molecular function and inter-molecular interactions
Externí odkaz:
https://doaj.org/article/fbb2d2a601a842d6a013340053cb038c
Publikováno v:
IEEE/ACM Transactions on Computational Biology and Bioinformatics. :1-9
Phylogenetically informed k-mers, or phylo-k-mers for short, are k-mers that are predicted to appear within a given genomic region at predefined locations of a fixed phylogeny. Given a reference alignment for this genomic region and assuming a phylog
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f920dc8e8b54b28e4eac2cc260308d6d
https://doi.org/10.1109/tcbb.2023.3278049
https://doi.org/10.1109/tcbb.2023.3278049
Publikováno v:
Molecular Ecology.
To help address the underrepresentation of arthropods and Asian biodiversity from climate-change assessments, we carried out year-long, weekly sampling campaigns with Malaise traps at different elevations and latitudes in Gaoligongshan National Park
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a670748f50a9e38cfb65b520317cefa1
https://doi.org/10.1111/mec.16747
https://doi.org/10.1111/mec.16747
Publikováno v:
Bioinformatics
Bioinformatics, Oxford University Press (OUP), 2020, pp.#btaa1020. ⟨10.1093/bioinformatics/btaa1020⟩
Bioinformatics, Oxford University Press (OUP), 2020, pp.#btaa1020. ⟨10.1093/bioinformatics/btaa1020⟩
MotivationNovel recombinant viruses may have important medical and evolutionary significance, as they sometimes display new traits not present in the parental strains. This is particularly concerning when the new viruses combine fragments coming from
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d2aa00ac7fe3d977f0ec6ee5b89ec469
http://europepmc.org/articles/PMC8016494
http://europepmc.org/articles/PMC8016494
Publikováno v:
Bioinformatics
Bioinformatics, 2020, 36 (21), pp.5264-5266. ⟨10.1093/bioinformatics/btaa657⟩
Bioinformatics, Oxford University Press (OUP), In press, ⟨10.1093/bioinformatics/btaa657⟩
Bioinformatics, 2020, 36 (21), pp.5264-5266. ⟨10.1093/bioinformatics/btaa657⟩
Bioinformatics, Oxford University Press (OUP), In press, ⟨10.1093/bioinformatics/btaa657⟩
Motivation Phylogenetic placement (PP) is a process of taxonomic identification for which several tools are now available. However, it remains difficult to assess which tool is more adapted to particular genomic data or a particular reference taxonom
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8f12192df1674fd67475a636ded77274
https://pubmed.ncbi.nlm.nih.gov/32697844
https://pubmed.ncbi.nlm.nih.gov/32697844
Autor:
Brent C. Emerson, Benjamin Linard, Alfried P. Vogler, María L. Moraza, Paula Arribas, Carmelo Andújar
Publikováno v:
Digital.CSIC. Repositorio Institucional del CSIC
instname
Molecular Biology and Evolution
Molecular Biology and Evolution, Oxford University Press (OUP), 2019, ⟨10.1093/molbev/msz255⟩
instname
Molecular Biology and Evolution
Molecular Biology and Evolution, Oxford University Press (OUP), 2019, ⟨10.1093/molbev/msz255⟩
High-throughput DNA methods hold great promise for phylogenetic analysis of lineages that are difficult to study with conventional molecular and morphological approaches. The mites (Acari), and in particular the highly diverse soil-dwelling lineages,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bdc8a4598c13dde0d3524c2dff942a6c
http://hdl.handle.net/10261/209118
http://hdl.handle.net/10261/209118
