SPARTA: Interpretable functional classification of microbiomes and detection of hidden cumulative effects.

Autor: Ruiz, Baptiste¹ (AUTHOR), Belcour, Arnaud^1,2 (AUTHOR), Blanquart, Samuel¹ (AUTHOR), Buffet-Bataillon, Sylvie^3,4 (AUTHOR), Le Huërou-Luron, Isabelle³ (AUTHOR), Siegel, Anne¹ (AUTHOR), Le Cunff, Yann¹ (AUTHOR) yann.le-cunff@irisa.fr

Publikováno v: PLoS Computational Biology. 11/18/2024, Vol. 20 Issue 11, p1-36. 36p.

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Highlighting discriminating functional annotations in patients' gut microbiota through Machine Learning classification applied to functional descriptions of the microbiome

Autor: Ruiz, Baptiste, Belcour, Arnaud, Blanquart, Samuel, Le Huërou-Luron, Isabelle, Buffet-Bataillon, Sylvie, Le Cunff, Yann, Siegel, Anne

Publikováno v: International Conference on Clinical Metagenomics
International Conference on Clinical Metagenomics, Oct 2022, Geneve, Switzerland

International audience; BackgroundUnderstanding the gut microbiota and its mechanisms has become a major point of interest in the medical field, with more and more studies correlating it to a variety of pathologies. Beyond information relative to its

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::55586c5f859af2ef17018834d33267f2
https://hal.inrae.fr/hal-04155604

Metabolic complementarity applied to the screening of microbiota and the identification of key species

Autor: Frioux, Clémence, Belcour, Arnaud, Aite, Meziane, Bretaudeau, Anthony, Hildebrand, Falk, Siegel, Anne

Publikováno v: CMSB 2021-19th International Conference on Computational Methods in Systems Biology
CMSB 2021-19th International Conference on Computational Methods in Systems Biology, Sep 2021, Bordeaux, France. pp.1-27
MPA 2021-8th Metabolic Pathway Analysis
MPA 2021-8th Metabolic Pathway Analysis, Aug 2021, Knoxville, TN, United States. pp.1-27
JOBIM 2021-Journées Ouvertes en Biologie, Informatique et Mathématiques
JOBIM 2021-Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2021, Paris, France

International audience

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::924ef92b375c1db8cc41623ddef9ea81
https://hal.inria.fr/hal-03440212

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