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pro vyhledávání: '"Baudot Anaïs"'
Motivation: In systems biology, modelling strategies aim to decode how molecular components interact to generate dynamical behaviour. Boolean modelling is more and more used, but the description of the dynamics from two-levels components may be too l
Externí odkaz:
http://arxiv.org/abs/2407.09954
Autor:
Zitnik, Marinka, Li, Michelle M., Wells, Aydin, Glass, Kimberly, Gysi, Deisy Morselli, Krishnan, Arjun, Murali, T. M., Radivojac, Predrag, Roy, Sushmita, Baudot, Anaïs, Bozdag, Serdar, Chen, Danny Z., Cowen, Lenore, Devkota, Kapil, Gitter, Anthony, Gosline, Sara, Gu, Pengfei, Guzzi, Pietro H., Huang, Heng, Jiang, Meng, Kesimoglu, Ziynet Nesibe, Koyuturk, Mehmet, Ma, Jian, Pico, Alexander R., Pržulj, Nataša, Przytycka, Teresa M., Raphael, Benjamin J., Ritz, Anna, Sharan, Roded, Shen, Yang, Singh, Mona, Slonim, Donna K., Tong, Hanghang, Yang, Xinan Holly, Yoon, Byung-Jun, Yu, Haiyuan, Milenković, Tijana
Network biology is an interdisciplinary field bridging computational and biological sciences that has proved pivotal in advancing the understanding of cellular functions and diseases across biological systems and scales. Although the field has been a
Externí odkaz:
http://arxiv.org/abs/2309.08478
Networks have provided extremely successful models of data and complex systems. Yet, as combinatorial objects, networks do not have in general intrinsic coordinates and do not typically lie in an ambient space. The process of assigning an embedding s
Externí odkaz:
http://arxiv.org/abs/2305.03474
The amount and variety of data is increasing drastically for several years. These data are often represented as networks, which are then explored with approaches arising from network theory. Recent years have witnessed the extension of network explor
Externí odkaz:
http://arxiv.org/abs/2107.04565
Network embedding approaches are gaining momentum to analyse a large variety of networks. Indeed, these approaches have demonstrated their efficiency for tasks such as community detection, node classification, and link prediction. However, very few n
Externí odkaz:
http://arxiv.org/abs/2008.10085
Publikováno v:
BMC Bioinformatics, Vol 11, Iss 1, p 597 (2010)
Abstract Background Cellular processes and pathways, whose deregulation may contribute to the development of cancers, are often represented as cascades of proteins transmitting a signal from the cell surface to the nucleus. However, recent functional
Externí odkaz:
https://doaj.org/article/15631d4597b548f9b90a203fc7f621ca
Publikováno v:
In Journal of Biomedical Informatics March 2023 139
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