Robust public computational services supporting Genome Assembly and Annotation for Australian researchers

Autor: Nelson, Tiffanie M., Christiansen, Jeffrey H., Al Bkhetan, Ziad, Bassetti, Madeline, Bromhead, Catherine, Burke, Melissa, Connolly, Keeva, Gustafsson, O. Johan R., Graham, Gavin, Gray, Mark, Gorse, Dominique, Hall, Christina, Hall, Kathryn, Hyde, Cameron, Khan, Farah Z., Lee, Justin, Manos, Steven, Makunin, Igor, Mok, Winnie, Phippard, Lisa, Price, Gareth, Stott, Audrey, Thang, Mike W. C., Ward, Nigel, Williams, Sarah, Syme, Anna, Lonie, Andrew

Australian BioCommons is developing community-scale digital capacity, training and bioinformatics infrastructure to support Australia’s life scientists. We establish computational tools, systems and services with dedicated user support and provided

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::46833868a17f707db301fa73ee104089

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update

Autor: Afgan, Enis, Nekrutenko, Anton, Grüning, Bjórn, Blankenberg, Daniel, Goecks, Jeremy, Schatz, Michael, Ostrovsky, Alexander, Mahmoud, Alexandru, Lonie, Andrew, Syme, Anna, Fouilloux, Anne, Bretaudeau, Anthony, Kumar, Anup, Eschenlauer, Arthur, Desanto, Assunta, Guerler, Aysam, Serrano-Solano, Beatriz, Batut, Bérénice, Grüning, Björn, Langhorst, Bradley, Carr, Bridget, Raubenolt, Bryan, Hyde, Cameron, Bromhead, Catherine, Barnett, Christopher, Royaux, Coline, Gallardo, Cristóbal, Fornika, Daniel, Baker, Dannon, Bouvier, Dave, Clements, Dave, de Lima Morais, David, Tabernero, David Lopez, Lariviere, Delphine, Nasr, Engy, Zambelli, Federico, Heyl, Florian, Psomopoulos, Fotis, Coppens, Frederik, Price, Gareth, Cuccuru, Gianmauro, Corguillé, Gildas Le, von Kuster, Greg, Akbulut, Gulsum Gudukbay, Rasche, Helena, Hotz, Hans-Rudolf, Eguinoa, Ignacio, Makunin, Igor, Ranawaka, Isuru, Taylor, James, Joshi, Jayadev, Hillman-Jackson, Jennifer, Chilton, John, Kamali, Kaivan, Suderman, Keith, Poterlowicz, Krzysztof, Yvan, Le Bras, Lopez-Delisle, Lucille, Sargent, Luke, Bassetti, Madeline, Tangaro, Marco Antonio, van den Beek, Marius, Čech, Martin, Bernt, Matthias, Fahrner, Matthias, Tekman, Mehmet, Föll, Melanie, Crusoe, Michael, Roncoroni, Miguel, Kucher, Natalie, Coraor, Nate, Stoler, Nicholas, Rhodes, Nick, Soranzo, Nicola, Pinter, Niko, Goonasekera, Nuwan, Moreno, Pablo, Videm, Pavankumar, Melanie, Petera, Mandreoli, Pietro, Jagtap, Pratik, Gu, Qiang, Weber, Ralf, Lazarus, Ross, Vorderman, Ruben, Hiltemann, Saskia, Golitsynskiy, Sergey, Garg, Shilpa, Bray, Simon, Gladman, Simon, Leo, Simone, Mehta, Subina, Griffin, Timothy, Jalili, Vahid, Yves, Vandenbrouck, Wen, Victor, Nagampalli, Vijay, Bacon, Wendi, de Koning, Willem, Maier, Wolfgang, Briggs, Peter

Publikováno v: Nucleic Acids Research
Nucleic Acids Research, 2022, 50 (W1), pp.W345-W351. ⟨10.1093/nar/gkac247⟩
Afgan, E, Nekrutenko, A, Grüning, B A, Blankenberg, D, Goecks, J, Schatz, M C, Ostrovsky, A E, Mahmoud, A, Lonie, A J, Syme, A, Fouilloux, A, Bretaudeau, A, Nekrutenko, A, Kumar, A, Eschenlauer, A C, Desanto, A D, Guerler, A, Serrano-Solano, B, Batut, B, Grüning, B A, Langhorst, B W, Carr, B, Raubenolt, B A, Hyde, C J, Bromhead, C J, Barnett, C B, Royaux, C, Gallardo, C, Blankenberg, D, Fornika, D J, Baker, D, Bouvier, D, Clements, D, De Lima Morais, D A, Tabernero, D L, Lariviere, D, Nasr, E, Afgan, E, Zambelli, F, Heyl, F, Psomopoulos, F, Coppens, F, Price, G R, Cuccuru, G, Corguillé, G L, Von Kuster, G, Akbulut, G G, Rasche, H, Hans-Rudolf, H, Eguinoa, I, Makunin, I, Ranawaka, I J, Taylor, J P, Joshi, J, Hillman-Jackson, J, Chilton, J M, Kamali, K, Suderman, K, Poterlowicz, K, Yvan, L B, Lopez-Delisle, L, Sargent, L, Bassetti, M E, Tangaro, M A, Van Den Beek, M, Cech, M, Bernt, M, Fahrner, M, Tekman, M, Föll, M C, Schatz, M C, Crusoe, M R, Roncoroni, M, Kucher, N, Coraor, N, Stoler, N, Rhodes, N, Soranzo, N, Pinter, N, Goonasekera, N A, Moreno, P A, Videm, P, Melanie, P, Mandreoli, P, Jagtap, P D, Gu, Q, Weber, R J M, Lazarus, R, Vorderman, R H P, Hiltemann, S, Golitsynskiy, S, Garg, S, Bray, S A, Gladman, S L, Leo, S, Mehta, S P, Griffin, T J, Jalili, V, Yves, V, Wen, V, Nagampalli, V K, Bacon, W A, De Koning, W, Maier, W & Briggs, P J 2022, ' The Galaxy platform for accessible, reproducible and collaborative biomedical analyses : 2022 update ', Nucleic Acids Research, vol. 50, no. W1, pp. W345-W351 . https://doi.org/10.1093/nar/gkac247
Nucleic Acids Research, 50(W1), W345-W351. Oxford University Press

Galaxy is a mature, browser accessible workbench for scientific computing. It enables scientists to share, analyze and visualize their own data, with minimal technical impediments. A thriving global community continues to use, maintain and contribute

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c391994be394041f6d06e629a94d035a
https://hal.science/hal-04142105

The Australian Apollo Service – establishing a national service – the process that got us there

Autor: Nelson, Tiffanie, Christiansen, Jefferey, Lee, Justin, Price, Gareth, Rhodes, Nick, Bassetti, Madeline, Bulgaris, Alejandro, Thang, Mike W C, Hyde, Cameron, Gray, Mark, Burke, Melissa, Hall, Christina, Davis, Brian, Manos, Steven, Lonie, Andrew, Ward, Nigel, Gorse, Dominique

This presentation took place during a session at theeResearch Australasia 2021 Conference11-15 October 2021. A recording of this presentation is available on the Australian BioCommons YouTube Channel. Background The development and operation of relev

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4f74399b8b8d3f9626b164f84c9c2275

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update

Autor: Ostrovsky, Alexander E., Mahmoud, Alexandru, Lonie, Andrew J., Syme, Anna, Fouilloux, Anne, Bretaudeau, Anthony, Nekrutenko, Anton, Kumar, Anup, Eschenlauer, Arthur C., DeSanto, Assunta D., Guerler, Aysam, Serrano-Solano, Beatriz, Batut, Berenice, Gruening, Bjoern A., Langhorst, Bradley W., Carr, Bridget, Raubenolt, Bryan A., Hyde, Cameron J., Bromhead, Catherine J., Barnett, Christopher B., Royaux, Coline, Gallardo, Cristobal, Blankenberg, Daniel, Fornika, Daniel J., Baker, Dannon, Bouvier, Dave, Clements, Dave, Morais, David A. de Lima, Tabernero, David Lopez, Lariviere, Delphine, Nasr, Engy, Afgan, Enis, Zambelli, Federico, Heyl, Florian, Psomopoulos, Fotis, Coppens, Frederik, Price, Gareth R., Cuccuru, Gianmauro, Le Corguille, Gildas, Von Kuster, Greg, Akbulut, Gulsum Gudukbay, Rasche, Helena, Hans-Rudolf, Hotz, Eguinoa, Ignacio, Makunin, Igor, Ranawaka, Isuru J., Taylor, James P., Joshi, Jayadev, Hillman-Jackson, Jennifer, Goecks, Jeremy, Chilton, John M., Kamali, Kaivan, Suderman, Keith, Poterlowicz, Krzysztof, Yvan, Le Bras, Lopez-Delisle, Lucille, Sargent, Luke, Bassetti, Madeline E., Tangaro, Marco Antonio, van den Beek, Marius, Cech, Martin, Bernt, Matthias, Fahrner, Matthias, Tekman, Mehmet, Foell, Melanie C., Schatz, Michael C., Crusoe, Michael R., Roncoroni, Miguel, Kucher, Natalie, Coraor, Nate, Stoler, Nicholas, Rhodes, Nick, Soranzo, Nicola, Pinter, Niko, Goonasekera, Nuwan A., Moreno, Pablo A., Videm, Pavankumar, Melanie, Petera, Mandreoli, Pietro, Jagtap, Pratik D., Gu, Qiang, Weber, Ralf J. M., Lazarus, Ross, Vorderman, Ruben H. P., Hiltemann, Saskia, Golitsynskiy, Sergey, Garg, Shilpa, Bray, Simon A., Gladman, Simon L., Leo, Simone, Mehta, Subina P., Griffin, Timothy J., Jalili, Vahid, Yves, Vandenbrouck, Wen, Victor, Nagampalli, Vijay K., Bacon, Wendi A., de Koning, Willem, Maier, Wolfgang, Briggs, Peter J.

Galaxy is a mature, browser accessible workbench for scientific computing. It enables scientists to share, analyze and visualize their own data, with minimal technical impediments. A thriving global community continues to use, maintain and contribute

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______185::c92133bde644f0ddb4778fcae612b2b1
https://infoscience.epfl.ch/record/293990