Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Bas Oude Munnink"'
Autor:
Áine O'Toole, Verity Hill, Oliver G. Pybus, Alexander Watts, Issac I. Bogoch, Kamran Khan, Jane P. Messina, The COVID-19 Genomics UK (COG-UK) consortium, Network for Genomic Surveillance in South Africa (NGS-SA), Brazil-UK CADDE Genomic Network, Houriiyah Tegally, Richard R. Lessells, Jennifer Giandhari, Sureshnee Pillay, Kefentse Arnold Tumedi, Gape Nyepetsi, Malebogo Kebabonye, Maitshwarelo Matsheka, Madisa Mine, Sima Tokajian, Hamad Hassan, Tamara Salloum, Georgi Merhi, Jad Koweyes, Jemma L. Geoghegan, Joep de Ligt, Xiaoyun Ren, Matthew Storey, Nikki E. Freed, Chitra Pattabiraman, Pramada Prasad, Anita S. Desai, Ravi Vasanthapuram, Thomas F. Schulz, Lars Steinbrück, Tanja Stadler, Swiss Viollier Sequencing Consortium, Antonio Parisi, Angelica Bianco, Darío García de Viedma, Sergio Buenestado-Serrano, Vítor Borges, Joana Isidro, Sílvia Duarte, João Paulo Gomes, Neta S. Zuckerman, Michal Mandelboim, Orna Mor, Torsten Seemann, Alicia Arnott, Jenny Draper, Mailie Gall, William Rawlinson, Ira Deveson, Sanmarié Schlebusch, Jamie McMahon, Lex Leong, Chuan Kok Lim, Maria Chironna, Daniela Loconsole, Antonin Bal, Laurence Josset, Edward Holmes, Kirsten St. George, Erica Lasek-Nesselquist, Reina S. Sikkema, Bas Oude Munnink, Marion Koopmans, Mia Brytting, V. Sudha rani, S. Pavani, Teemu Smura, Albert Heim, Satu Kurkela, Massab Umair, Muhammad Salman, Barbara Bartolini, Martina Rueca, Christian Drosten, Thorsten Wolff, Olin Silander, Dirk Eggink, Chantal Reusken, Harry Vennema, Aekyung Park, Christine Carrington, Nikita Sahadeo, Michael Carr, Gabo Gonzalez, SEARCH Alliance San Diego, National Virus Reference Laboratory, SeqCOVID-Spain, Danish Covid-19 Genome Consortium (DCGC), Communicable Diseases Genomic Network (CDGN), Dutch National SARS-CoV-2 surveillance program, Division of Emerging Infectious Diseases (KDCA), Tulio de Oliveira, Nuno Faria, Andrew Rambaut, Moritz U. G. Kraemer
Publikováno v:
Wellcome Open Research, Vol 6 (2021)
Late in 2020, two genetically-distinct clusters of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) with mutations of biological concern were reported, one in the United Kingdom and one in South Africa. Using a combination of data from ro
Externí odkaz:
https://doaj.org/article/63672d265a40472ea7302adbef66d81f
Autor:
Áine O'Toole, Verity Hill, Oliver G. Pybus, Alexander Watts, Issac I. Bogoch, Kamran Khan, Jane P. Messina, The COVID-19 Genomics UK (COG-UK) consortium, Network for Genomic Surveillance in South Africa (NGS-SA), Brazil-UK CADDE Genomic Network, Houriiyah Tegally, Richard R. Lessells, Jennifer Giandhari, Sureshnee Pillay, Kefentse Arnold Tumedi, Gape Nyepetsi, Malebogo Kebabonye, Maitshwarelo Matsheka, Madisa Mine, Sima Tokajian, Hamad Hassan, Tamara Salloum, Georgi Merhi, Jad Koweyes, Jemma L. Geoghegan, Joep de Ligt, Xiaoyun Ren, Matthew Storey, Nikki E. Freed, Chitra Pattabiraman, Pramada Prasad, Anita S. Desai, Ravi Vasanthapuram, Thomas F. Schulz, Lars Steinbrück, Tanja Stadler, Swiss Viollier Sequencing Consortium, Antonio Parisi, Angelica Bianco, Darío García de Viedma, Sergio Buenestado-Serrano, Vítor Borges, Joana Isidro, Sílvia Duarte, João Paulo Gomes, Neta S. Zuckerman, Michal Mandelboim, Orna Mor, Torsten Seemann, Alicia Arnott, Jenny Draper, Mailie Gall, William Rawlinson, Ira Deveson, Sanmarié Schlebusch, Jamie McMahon, Lex Leong, Chuan Kok Lim, Maria Chironna, Daniela Loconsole, Antonin Bal, Laurence Josset, Edward Holmes, Kirsten St. George, Erica Lasek-Nesselquist, Reina S. Sikkema, Bas Oude Munnink, Marion Koopmans, Mia Brytting, V. Sudha rani, S. Pavani, Teemu Smura, Albert Heim, Satu Kurkela, Massab Umair, Muhammad Salman, Barbara Bartolini, Martina Rueca, Christian Drosten, Thorsten Wolff, Olin Silander, Dirk Eggink, Chantal Reusken, Harry Vennema, Aekyung Park, Christine Carrington, Nikita Sahadeo, Michael Carr, Gabo Gonzalez, SEARCH Alliance San Diego, National Virus Reference Laboratory, SeqCOVID-Spain, Danish Covid-19 Genome Consortium (DCGC), Communicable Diseases Genomic Network (CDGN), Dutch National SARS-CoV-2 surveillance program, Division of Emerging Infectious Diseases (KDCA), Tulio de Oliveira, Nuno Faria, Andrew Rambaut, Moritz U. G. Kraemer
Publikováno v:
Wellcome Open Research, Vol 6 (2021)
Late in 2020, two genetically-distinct clusters of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) with mutations of biological concern were reported, one in the United Kingdom and one in South Africa. Using a combination of data from ro
Externí odkaz:
https://doaj.org/article/4d50ca9e659b4b69b1e58f7d34df6deb
Autor:
Syriam Sooksawasdi Na Ayudhya, Adam Meijer, Lisa Bauer, Bas Oude Munnink, Carmen Embregts, Lonneke Leijten, Jurre Y. Siegers, Brigitta M. Laksono, Frank van Kuppeveld, Thijs Kuiken, Corine GeurtsvanKessel, Debby van Riel
Publikováno v:
mSphere, Vol 5, Iss 6 (2020)
ABSTRACT Since its emergence in the United States in 2014, enterovirus D68 (EV-D68) has been and is associated with severe respiratory diseases and acute flaccid myelitis. Even though EV-D68 has been shown to replicate in different neuronal cells in
Externí odkaz:
https://doaj.org/article/a12b94232b714cbd952b775fd27861fa
Autor:
Syriam Sooksawasdi Na Ayudhya, Adam Meijer, Lisa Bauer, Bas Oude Munnink, Carmen Embregts, Lonneke Leijten, Jurre Y. Siegers, Brigitta M. Laksono, Frank van Kuppeveld, Thijs Kuiken, Corine GeurtsvanKessel, Debby van Riel
Publikováno v:
mSphere, Vol 5, Iss 6 (2020)
Externí odkaz:
https://doaj.org/article/86133a47667b440fae947a8e918737d4
Autor:
Matthew Cotten, Bas Oude Munnink, Marta Canuti, Martin Deijs, Simon J Watson, Paul Kellam, Lia van der Hoek
Publikováno v:
PLoS ONE, Vol 9, Iss 4, p e93269 (2014)
We have developed a full genome virus detection process that combines sensitive nucleic acid preparation optimised for virus identification in fecal material with Illumina MiSeq sequencing and a novel post-sequencing virus identification algorithm. E
Externí odkaz:
https://doaj.org/article/e0ffa8ba74c6429595faced16993c935
Publikováno v:
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 76(3), e507-e509. Oxford University Press
Viral evolution was evaluated in 47 immunocompromised patients treated with sotrovimab. Sequencing of SARS-CoV-2 following therapy was successful in 16. Mutations associated with sotrovimab resistance were documented in 6; viral replication continued
Autor:
Ellen C. Carbo, Kees Mourik, Stefan A. Boers, Bas Oude Munnink, David Nieuwenhuijse, Marcel Jonges, Matthijs R. A. Welkers, Sebastien Matamoros, Joost van Harinxma thoe Slooten, Margriet E. M. Kraakman, Evita Karelioti, David van der Meer, Karin Ellen Veldkamp, Aloys C. M. Kroes, Igor Sidorov, Jutte J. C. de Vries
Publikováno v:
European Journal of Clinical Microbiology and Infectious Diseases, 42(6), 701-713. Springer Verlag
Carbo, E C, Mourik, K, Boers, S A, Munnink, B O, Nieuwenhuijse, D, Jonges, M, Welkers, M R A, Matamoros, S, van Harinxma thoe Slooten, J, Kraakman, M E M, Karelioti, E, van der Meer, D, Veldkamp, K E, Kroes, A C M, Sidorov, I & de Vries, J J C 2023, ' A comparison of five Illumina, Ion Torrent, and nanopore sequencing technology-based approaches for whole genome sequencing of SARS-CoV-2 ', European Journal of Clinical Microbiology and Infectious Diseases, vol. 42, no. 6, pp. 701-713 . https://doi.org/10.1007/s10096-023-04590-0
European Journal of Clinical Microbiology and Infectious Diseases, 42(6), 701-713. Springer-Verlag
Carbo, E C, Mourik, K, Boers, S A, Munnink, B O, Nieuwenhuijse, D, Jonges, M, Welkers, M R A, Matamoros, S, van Harinxma thoe Slooten, J, Kraakman, M E M, Karelioti, E, van der Meer, D, Veldkamp, K E, Kroes, A C M, Sidorov, I & de Vries, J J C 2023, ' A comparison of five Illumina, Ion Torrent, and nanopore sequencing technology-based approaches for whole genome sequencing of SARS-CoV-2 ', European Journal of Clinical Microbiology and Infectious Diseases, vol. 42, no. 6, pp. 701-713 . https://doi.org/10.1007/s10096-023-04590-0
European Journal of Clinical Microbiology and Infectious Diseases, 42(6), 701-713. Springer-Verlag
Rapid identification of the rise and spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants of concern remains critical for monitoring of the efficacy of diagnostics, therapeutics, vaccines, and control strategies. A wide ran
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4e485d565481a63e65fef9a44509bd25
https://pure.amc.nl/en/publications/a-comparison-of-five-illumina-ion-torrent-and-nanopore-sequencing-technologybased-approaches-for-whole-genome-sequencing-of-sarscov2(e22d77a5-f23a-4d3f-95e2-b942aea14899).html
https://pure.amc.nl/en/publications/a-comparison-of-five-illumina-ion-torrent-and-nanopore-sequencing-technologybased-approaches-for-whole-genome-sequencing-of-sarscov2(e22d77a5-f23a-4d3f-95e2-b942aea14899).html
Autor:
Katarzyna Domańska-Blicharz, Anna Orłowska, Marcin Smreczak, Bas Oude Munnink, Paweł Trębas, Wojciech Socha, Krzysztof Niemczuk, Magdalena Kawiak-Sadurska, Justyna Opolska, Anna Lisowska, Aleksandra Giza, Arkadiusz Bomba, Ewelina Iwan, Marion Koopmans, Jerzy Rola
Publikováno v:
Journal of Veterinary Research (Poland), 66(4), 449-458. De Gruyter Open Ltd.
Introduction Many countries have reported severe acute respiratory syndrome-coronavirus 2 (SARS-CoV-2) infections in mink, and transmission back to humans has raised the concern of novel variants emerging in these animals. The monitoring system on Po
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::42f7577544a1724ea1fdb65802e8f849
https://pure.eur.nl/en/publications/78aee468-9c27-441c-a80f-5d15b9446403
https://pure.eur.nl/en/publications/78aee468-9c27-441c-a80f-5d15b9446403
Publikováno v:
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
Viral evolution was evaluated in 47 immunocompromised patients treated with sotrovimab. Sequencing of SARS-CoV-2 following therapy was successful in 16. Mutations associated with sotrovimab resistance were documented in 6, viral replication continued
BackgroundSotrovimab is a monoclonal antibody that neutralizes SARS-CoV-2 by binding to a highly conserved epitope in the receptor binding domain. It retains activity against the Omicron BA.1 variant and is used to treat immunocompromised patients as
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3c03a66d7721c30bcbdb68fb8b8a916b
https://doi.org/10.1101/2022.04.06.22273503
https://doi.org/10.1101/2022.04.06.22273503