Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Barbara Zehentner"'
Publikováno v:
BMC Microbiology, Vol 23, Iss 1, Pp 1-17 (2023)
Abstract Analysis of genome wide transcription start sites (TSSs) revealed an unexpected complexity since not only canonical TSS of annotated genes are recognized by RNA polymerase. Non-canonical TSS were detected antisense to, or within, annotated g
Externí odkaz:
https://doaj.org/article/f510639c8a714ebf8328cac2ebb88923
Publikováno v:
Microbiology Spectrum, Vol 11, Iss 1 (2023)
ABSTRACT The abundance of long overlapping genes in prokaryotic genomes is likely to be significantly underestimated. To date, only a few examples of such genes are fully established. Using RNA sequencing and ribosome profiling, we found expression o
Externí odkaz:
https://doaj.org/article/a433a119bb7b48bc91202fe9ec9dc259
Publikováno v:
Frontiers in Microbiology, Vol 11 (2020)
Antisense transcription is well known in bacteria. However, translation of antisense RNAs is typically not considered, as the implied overlapping coding at a DNA locus is assumed to be highly improbable. Therefore, such overlapping genes are systemat
Externí odkaz:
https://doaj.org/article/c92dee358fb74b49aa5f49dcc0a853bf
Publikováno v:
Microbiology spectrum.
The abundance of long overlapping genes in prokaryotic genomes is likely to be significantly underestimated. To date, only a few examples of such genes are fully established. Using RNA sequencing and ribosome profiling, we found expression of novel o
Autor:
Sonja, Vanderhaeghen, Barbara, Zehentner, Siegfried, Scherer, Klaus, Neuhaus, Zachary, Ardern
Publikováno v:
Scientific Reports, Vol 8, Iss 1, Pp 1-13 (2018)
Scientific Reports
Scientific Reports
Only a few overlapping gene pairs are known in the best-analyzed bacterial model organism Escherichia coli. Automatic annotation programs usually annotate only one out of six reading frames at a locus, allowing only small overlaps between protein-cod
SUMMARYThe genetic code allows six reading frames at a double-stranded DNA locus, and many open reading frames (ORFs) overlap extensively with ORFs of annotated genes (e.g., at least 30 bp or having an embedded ORF). Currently, bacterial genome annot
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::530b93d3862ce267406a994f8a63cd20
https://doi.org/10.1101/2020.11.18.388249
https://doi.org/10.1101/2020.11.18.388249
Publikováno v:
Frontiers in Microbiology
Antisense transcription is well known in bacteria. However, translation of antisense RNAs is typically not considered, as the implied overlapping coding at a DNA locus is assumed to be highly improbable. Therefore, such overlapping genes are systemat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::622faae8127e3d872de7292c10890700
https://doi.org/10.1101/852251
https://doi.org/10.1101/852251