Zobrazeno 1 - 10
of 107
pro vyhledávání: '"Barbara A Methé"'
Publikováno v:
PLoS ONE, Vol 8, Iss 5, p e63139 (2013)
Analyses of the taxonomic diversity associated with the human microbiome continue to be an area of great importance. The study of the nature and extent of the commonly shared taxa ("core"), versus those less prevalent, establishes a baseline for comp
Externí odkaz:
https://doaj.org/article/9dd3cd38b145458da2beafea4bc20ce4
Autor:
Dirk Gevers, Rob Knight, Joseph F Petrosino, Katherine Huang, Amy L McGuire, Bruce W Birren, Karen E Nelson, Owen White, Barbara A Methé, Curtis Huttenhower
Publikováno v:
PLoS Biology, Vol 10, Iss 8, p e1001377 (2012)
Externí odkaz:
https://doaj.org/article/c0aef8d2287344ee8b2ec06bdd07e5fb
Publikováno v:
PLoS ONE, Vol 7, Iss 6, p e32118 (2012)
Analysis of human body microbial diversity is fundamental to understanding community structure, biology and ecology. The National Institutes of Health Human Microbiome Project (HMP) has provided an unprecedented opportunity to examine microbial diver
Externí odkaz:
https://doaj.org/article/42c0b654ae604cc182a59f9418ab270a
Autor:
Johannes Goll, Mathangi Thiagarajan, Sahar Abubucker, Curtis Huttenhower, Shibu Yooseph, Barbara A Methé
Publikováno v:
PLoS ONE, Vol 7, Iss 6, p e29044 (2012)
As metagenomic studies continue to increase in their number, sequence volume and complexity, the scalability of biological analysis frameworks has become a rate-limiting factor to meaningful data interpretation. To address this issue, we have develop
Externí odkaz:
https://doaj.org/article/3405d9d5c5cb4a03a1020930588315cf
Publikováno v:
PLoS ONE, Vol 7, Iss 12, p e52137 (2012)
Current Bayesian microarray models that pool multiple studies assume gene expression is independent of other genes. However, in prokaryotic organisms, genes are arranged in units that are co-regulated (called operons). Here, we introduce a new Bayesi
Externí odkaz:
https://doaj.org/article/5f380c629f5e40289f58d2c270500c22
Autor:
Raymond J DiDonato, Nelson D Young, Jessica E Butler, Kuk-Jeong Chin, Kim K Hixson, Paula Mouser, Mary S Lipton, Robert DeBoy, Barbara A Methé
Publikováno v:
PLoS ONE, Vol 5, Iss 11, p e14072 (2010)
Anaerobic polycyclic hydrocarbon (PAH) degradation coupled to sulfate reduction may be an important mechanism for in situ remediation of contaminated sediments. Steps involved in the anaerobic degradation of 2-methylnaphthalene have been described in
Externí odkaz:
https://doaj.org/article/4e3fb349706947a1a37d8ae58085ddb6
Autor:
Harish Nagarajan, Jessica E Butler, Anna Klimes, Yu Qiu, Karsten Zengler, Joy Ward, Nelson D Young, Barbara A Methé, Bernhard Ø Palsson, Derek R Lovley, Christian L Barrett
Publikováno v:
PLoS ONE, Vol 5, Iss 6, p e10922 (2010)
State-of-the-art DNA sequencing technologies are transforming the life sciences due to their ability to generate nucleotide sequence information with a speed and quantity that is unapproachable with traditional Sanger sequencing. Genome sequencing is
Externí odkaz:
https://doaj.org/article/a37fbc30ee124fdc8fe736ec459fb4f8
Autor:
Kelly P Nevin, Byoung-Chan Kim, Richard H Glaven, Jessica P Johnson, Trevor L Woodard, Barbara A Methé, Raymond J Didonato, Sean F Covalla, Ashley E Franks, Anna Liu, Derek R Lovley
Publikováno v:
PLoS ONE, Vol 4, Iss 5, p e5628 (2009)
The mechanisms by which Geobacter sulfurreducens transfers electrons through relatively thick (>50 microm) biofilms to electrodes acting as a sole electron acceptor were investigated. Biofilms of Geobacter sulfurreducens were grown either in flow-thr
Externí odkaz:
https://doaj.org/article/78b17e3d7bb74826ac165eea63e8cf9f
Autor:
Derrick E Fouts, Heather L Tyler, Robert T DeBoy, Sean Daugherty, Qinghu Ren, Jonathan H Badger, Anthony S Durkin, Heather Huot, Susmita Shrivastava, Sagar Kothari, Robert J Dodson, Yasmin Mohamoud, Hoda Khouri, Luiz F W Roesch, Karen A Krogfelt, Carsten Struve, Eric W Triplett, Barbara A Methé
Publikováno v:
PLoS Genetics, Vol 4, Iss 7, p e1000141 (2008)
We report here the sequencing and analysis of the genome of the nitrogen-fixing endophyte, Klebsiella pneumoniae 342. Although K. pneumoniae 342 is a member of the enteric bacteria, it serves as a model for studies of endophytic, plant-bacterial asso
Externí odkaz:
https://doaj.org/article/969d1b63d3c9442588e2597b8f465ee7
Autor:
Daniel G. Dunlap, Libing Yang, Shulin Qin, Kelvin Li, Adam Fitch, Laurence Huang, Bryan J. McVerry, Timothy W. Hand, Barbara A. Methé, Alison Morris
Publikováno v:
Microbiome, Vol 11, Iss 1, Pp 1-10 (2023)
Abstract Background The advent of culture-independent, next-generation DNA sequencing has led to the discovery of distinct lung bacterial communities. Studies of lung microbiome taxonomy often reveal only subtle differences between health and disease
Externí odkaz:
https://doaj.org/article/35a0074d15624af692ef8314957d1bdc