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Comparison of leaf transcriptome in response to Rhizoctonia solani infection between resistant and susceptible rice cultivars

Autor: Wei Shi, Shao-Lu Zhao, Kai Liu, Yi-Biao Sun, Zheng-Bin Ni, Gui-Yun Zhang, Hong-Sheng Tang, Jing-Wen Zhu, Bai-Jie Wan, Hong-Qin Sun, Jin-Ying Dai, Ming-Fa Sun, Guo-Hong Yan, Ai-Min Wang, Guo-Yong Zhu

Publikováno v: BMC Genomics, Vol 21, Iss 1, Pp 1-16 (2020)

Abstract Background Sheath blight (SB), caused by Rhizoctonia solani, is a common rice disease worldwide. Currently, rice cultivars with robust resistance to R. solani are still lacking. To provide theoretic basis for molecular breeding of R. solani-

Externí odkaz: https://doaj.org/article/763c0d635bf144799fb1ce05f38070ce

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Additional file 6 of Comparison of leaf transcriptome in response to Rhizoctonia solani infection between resistant and susceptible rice cultivars

Autor: Shi, Wei, Shao-Lu Zhao, Liu, Kai, Yi-Biao Sun, Zheng-Bin Ni, Zhang, Gui-Yun, Tang, Hong-Sheng, Zhu, Jing-Wen, Bai-Jie Wan, Sun, Hong-Qin, Dai, Jin-Ying, Ming-Fa Sun, Yan, Guo-Hong, Wang, Ai-Min, Zhu, Guo-Yong

Additional file 6: Supplementary Alignment file 2 Sequence alignment of C4H gene between JG and YH. * indicates identical position. Blue line: stop codon ATG. Red line: mutations.

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Additional file 7 of Comparison of leaf transcriptome in response to Rhizoctonia solani infection between resistant and susceptible rice cultivars

Additional file 7: Supplementary Alignment file 3 Sequence alignment of EIN2 isoform 1 gene between JG and YH. * indicates identical position.

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Additional file 8 of Comparison of leaf transcriptome in response to Rhizoctonia solani infection between resistant and susceptible rice cultivars

Additional file 8: Supplementary Alignment file 4 Sequence alignment of EIN2 isoform 2 gene between JG and YH. * indicates identical position.

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Additional file 9 of Comparison of leaf transcriptome in response to Rhizoctonia solani infection between resistant and susceptible rice cultivars

Additional file 9: Table S1. Primers for real-time quantitative PCR of selected DEGs. Table S2. Summary of RNA sequencing results. Table S3. FPKM values of selected DEGs. Data show mean ± standard error of FPKM values. * indicates significantly diff

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Additional file 5 of Comparison of leaf transcriptome in response to Rhizoctonia solani infection between resistant and susceptible rice cultivars

Additional file 5: Supplementary Alignment file 1 Sequence alignment of WRKY33 gene between JG and YH. * indicates identical position.

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