Zobrazeno 1 - 10
of 993
pro vyhledávání: '"Bacterial Genomics"'
Autor:
Tu Luan, Seth Commichaux, Maria Hoffmann, Victor Jayeola, Jae Hee Jang, Mihai Pop, Hugh Rand, Yan Luo
Publikováno v:
BMC Genomics, Vol 25, Iss 1, Pp 1-17 (2024)
Abstract Background Oxford Nanopore provides high throughput sequencing platforms able to reconstruct complete bacterial genomes with 99.95% accuracy. However, even small levels of error can obscure the phylogenetic relationships between closely rela
Externí odkaz:
https://doaj.org/article/5e843866bfc74f04884ca6746d393d87
Publikováno v:
mSystems, Vol 9, Iss 4 (2024)
ABSTRACTFunctional genomics techniques, such as transposon insertion sequencing and RNA-sequencing, are key to studying relative differences in bacterial mutant fitness or gene expression under selective conditions. However, certain stress conditions
Externí odkaz:
https://doaj.org/article/ac50e67572e34d66a50ba59f68939010
Publikováno v:
Frontiers in Microbiology, Vol 14 (2024)
Source attribution has traditionally involved combining epidemiological data with different pathogen characterisation methods, including 7-gene multi locus sequence typing (MLST) or serotyping, however, these approaches have limited resolution. In co
Externí odkaz:
https://doaj.org/article/f327f4f89b9d43a1978e2e5517d9fd29
Autor:
Margaret D. Weinroth, Michael L. Clawson, Gregory P. Harhay, Mark Eppinger, Dayna M. Harhay, Timothy P. L. Smith, James L. Bono
Publikováno v:
Frontiers in Microbiology, Vol 14 (2023)
Shiga toxin-producing Escherichia coli (STEC) O157:H7 strains with the T allele in the translocated intimin receptor polymorphism (tir) 255 A > T gene associate with human disease more than strains with an A allele; however, the allele is not thought
Externí odkaz:
https://doaj.org/article/d9a0306cf8ed46d69c809ab1697f8851
Autor:
Matheus Assis Côrtes Esteves, Alice Slotfeldt Viana, Gabriela Nogueira Viçosa, Ana Maria Nunes Botelho, Ahmed M. Moustafa, Felipe Raposo Passos Mansoldo, Adriana Lucia Pires Ferreira, Alane Beatriz Vermelho, Bernadete Teixeira Ferreira-Carvalho, Paul Joseph Planet, Agnes Marie Sá Figueiredo
Publikováno v:
Frontiers in Microbiology, Vol 14 (2023)
Hospital bloodstream infection (BSI) caused by methicillin-resistant Staphylococcus aureus (MRSA) is a major cause of morbidity and mortality and is frequently related to invasive procedures and medically complex patients. An important feature of MRS
Externí odkaz:
https://doaj.org/article/8712b56eb9034959a526b1420e8ce6e1
Publikováno v:
F1000Research, Vol 12 (2023)
Background: Advancements in DNA sequencing technology have transformed the field of bacterial genomics, allowing for faster and more cost effective chromosome level assemblies compared to a decade ago. However, transforming raw reads into a complete
Externí odkaz:
https://doaj.org/article/6c4884359b8244d4a7d26ccb6c541828
Autor:
Ting Li, Jiayin Huang, Shimin Yang, Jianyu Chen, Zhenjiang Yao, Minghao Zhong, Xinguang Zhong, Xiaohua Ye
Publikováno v:
Microbiology Spectrum, Vol 11, Iss 4 (2023)
ABSTRACT Despite the widespread implementation of pneumococcal vaccines, hypervirulent Streptococcus pneumoniae serotype 19A is endemic worldwide. It is still unclear whether specific genetic elements contribute to complex pathogenicity of serotype 1
Externí odkaz:
https://doaj.org/article/1117264afed2435cbb93e0d402a867a1
Autor:
Henry D. Naranjo, Angélique Rat, Noémie De Zutter, Emmelie De Ridder, Liesbeth Lebbe, Kris Audenaert, Anne Willems
Publikováno v:
Microbiology Spectrum, Vol 11, Iss 4 (2023)
ABSTRACT The world’s population is increasing at a rate not seen in the past. Agriculture, providing food for this increasing population, is reaching its boundaries of space and natural resources. In addition, changing legislation and increased eco
Externí odkaz:
https://doaj.org/article/da8abb2fd7684c7d9af6d46ea413c78e
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