Zobrazeno 1 - 10
of 752
pro vyhledávání: '"Backofen, Rolf"'
Autor:
Otto, Christina, Möhl, Mathias, Heyne, Steffen, Amit, Mika, Landau, Gad M., Backofen, Rolf, Will, Sebastian
Publikováno v:
BMC Bioinformatics 2014, 15:404 doi:10.1186/s12859-014-0404-0
Background: Identifying sequence-structure motifs common to two RNAs can speed up the comparison of structural RNAs substantially. The core algorithm of the existent approach ExpaRNA solves this problem for a priori known input structures. However, s
Externí odkaz:
https://ul.qucosa.de/id/qucosa%3A13122
https://ul.qucosa.de/api/qucosa%3A13122/attachment/ATT-0/
https://ul.qucosa.de/api/qucosa%3A13122/attachment/ATT-0/
Autor:
Bompfünewerer, Athanasius F., Backofen, Rolf, Bernhart, Stephan H., Hertel, Jana, Hofacker, Ivo L., Stadler, Peter F., Will, Sebastian
Dynamic Programming Algorithms solve many standard problems of RNA bioinformatics in polynomial time. In this contribution we discuss a series of variations on these standard methods that implement refined biophysical models, such as a restriction of
Externí odkaz:
https://ul.qucosa.de/id/qucosa%3A32162
https://ul.qucosa.de/api/qucosa%3A32162/attachment/ATT-0/
https://ul.qucosa.de/api/qucosa%3A32162/attachment/ATT-0/
Autor:
Backofen, Rolf, Bernhart, Stephan H., Flamm, Christoph, Fried, Claudia, Fritzsch, Guido, Hackermüller, Jörg, Hertel, Jana, Hofacker, Ivo L., Missal, Kristin, Mosig, Axel, Prohaska, Sonja J., Rose, Dominic, Stadler, Peter F., Tanzer, Andrea, Washietl, Stefan, Will, Sebastian
Starting with the discovery of microRNAs and the advent of genome‐wide transcriptomics, non‐protein‐coding transcripts have moved from a fringe topic to a central field research in molecular biology. In this contribution we review the state of
Externí odkaz:
https://ul.qucosa.de/id/qucosa%3A32161
https://ul.qucosa.de/api/qucosa%3A32161/attachment/ATT-0/
https://ul.qucosa.de/api/qucosa%3A32161/attachment/ATT-0/
The RFAM database defines families of ncRNAs by means of sequence similarities that are sufficient to establish homology. In some cases, such as microRNAs and box H/ACA snoRNAs, functional commonalities define classes of RNAs that are characterized b
Externí odkaz:
https://ul.qucosa.de/id/qucosa%3A31893
https://ul.qucosa.de/api/qucosa%3A31893/attachment/ATT-0/
https://ul.qucosa.de/api/qucosa%3A31893/attachment/ATT-0/
We present a generic, problem-independent algorithm for exploration of the low-energy portion of the energy landscape of discrete systems and apply it to the energy landscape of lattice proteins. Starting from a set of optimal and near-optimal confor
Externí odkaz:
https://ul.qucosa.de/id/qucosa%3A31878
https://ul.qucosa.de/api/qucosa%3A31878/attachment/ATT-0/
https://ul.qucosa.de/api/qucosa%3A31878/attachment/ATT-0/
Autor:
Steffens, Sabine, Schröder, Katrin, Krüger, Martina, Maack, Christoph, Streckfuss-Bömeke, Katrin, Backs, Johannes, Backofen, Rolf, Baeßler, Bettina, Devaux, Yvan, Gilsbach, Ralf, Heijman, Jordi, Knaus, Jochen, Kramann, Rafael, Linz, Dominik, Lister, Allyson L., Maatz, Henrike, Maegdefessel, Lars, Mayr, Manuel, Meder, Benjamin, Nussbeck, Sara Y.
Publikováno v:
Clinical Research in Cardiology; May2024, Vol. 113 Issue 5, p672-679, 8p
Autor:
Dao, Phuong, Hoinka, Jan, Wang, Yijie, Takahashi, Mayumi, Zhou, Jiehua, Costa, Fabrizio, Rossi, John, Burnett, John, Backofen, Rolf, Przytycka, Teresa M.
Aptamers, short synthetic RNA/DNA molecules binding specific targets with high affinity and specificity, are utilized in an increasing spectrum of bio-medical applications. Aptamers are identified in vitro via the Systematic Evolution of Ligands by E
Externí odkaz:
http://arxiv.org/abs/1604.03081
Autor:
Banerjee, Poulomi, Paza, Evdokia, Perkins, Emma M., James, Owen G., Kenkhuis, Boyd, Lloyd, Amy F., Burr, Karen, Story, David, Yusuf, Dilmurat, He, Xin, Backofen, Rolf, Dando, Owen, Chandran, Siddharthan, Priller, Josef
Publikováno v:
In Stem Cell Research December 2020 49
Autor:
Fischer, Sandra, Lichtenthaeler, Chiara, Stepanenko, Anastasiya, Heyl, Florian, Maticzka, Daniel, Kemmerer, Katrin, Klostermann, Melina, Backofen, Rolf, Zarnack, Kathi, Weigand, Julia E.
Publikováno v:
Biological Chemistry; Apr2024, Vol. 405 Issue 4, p229-239, 11p