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of 51
pro vyhledávání: '"BAUMGARTNER JR, WILLIAM A."'
Autor:
Callahan, Tiffany J., Tripodi, Ignacio J., Stefanski, Adrianne L., Cappelletti, Luca, Taneja, Sanya B., Wyrwa, Jordan M., Casiraghi, Elena, Matentzoglu, Nicolas A., Reese, Justin, Silverstein, Jonathan C., Hoyt, Charles Tapley, Boyce, Richard D., Malec, Scott A., Unni, Deepak R., Joachimiak, Marcin P., Robinson, Peter N., Mungall, Christopher J., Cavalleri, Emanuele, Fontana, Tommaso, Valentini, Giorgio, Mesiti, Marco, Gillenwater, Lucas A., Santangelo, Brook, Vasilevsky, Nicole A., Hoehndorf, Robert, Bennett, Tellen D., Ryan, Patrick B., Hripcsak, George, Kahn, Michael G., Bada, Michael, Baumgartner Jr, William A., Hunter, Lawrence E.
Translational research requires data at multiple scales of biological organization. Advancements in sequencing and multi-omics technologies have increased the availability of these data, but researchers face significant integration challenges. Knowle
Externí odkaz:
http://arxiv.org/abs/2307.05727
Autor:
Callahan, Tiffany J., Stefanski, Adrianne L., Wyrwa, Jordan M., Zeng, Chenjie, Ostropolets, Anna, Banda, Juan M., Baumgartner Jr., William A., Boyce, Richard D., Casiraghi, Elena, Coleman, Ben D., Collins, Janine H., Deakyne-Davies, Sara J., Feinstein, James A., Haendel, Melissa A., Lin, Asiyah Y., Martin, Blake, Matentzoglu, Nicolas A., Meeker, Daniella, Reese, Justin, Sinclair, Jessica, Taneja, Sanya B., Trinkley, Katy E., Vasilevsky, Nicole A., Williams, Andrew, Zhang, Xingman A., Denny, Joshua C., Robinson, Peter N., Ryan, Patrick, Hripcsak, George, Bennett, Tellen D., Hunter, Lawrence E., Kahn, Michael G.
Background: Common data models solve many challenges of standardizing electronic health record (EHR) data, but are unable to semantically integrate all the resources needed for deep phenotyping. Open Biological and Biomedical Ontology (OBO) Foundry o
Externí odkaz:
http://arxiv.org/abs/2209.04732
Autor:
Callahan, Tiffany J., Stefanski, Adrianne L., Kim, Jin-Dong, Baumgartner Jr., William A., Wyrwa, Jordan M., Hunter, Lawrence E.
Preeclampsia is a leading cause of maternal and fetal morbidity and mortality. Currently, the only definitive treatment of preeclampsia is delivery of the placenta, which is central to the pathogenesis of the disease. Transcriptional profiling of hum
Externí odkaz:
http://arxiv.org/abs/2207.14294
Akademický článek
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Autor:
Callahan, Tiffany J, Stefanski, Adrianne L, Kim, Jin-Dong, Baumgartner Jr., William A, Wyrwa, Jordan M, Hunter, Lawrence E
Preeclampsia is a leading cause of maternal and fetal morbidity and mortality. Currently, the only definitive treatment of preeclampsia is delivery of the placenta, which is central to the pathogenesis of the disease. Transcriptional profiling of hum
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8202fa6ac66660ea3846744265e9b43f
Autor:
Taneja, Sanya Bathla, Joachimiak, Marcin P, Hegde, Harshad, Baumgartner Jr., William A, Caufield, J. Harry, Callahan, Tiffany J, Mungall, Christopher J, Boyce, Richard D
Named Entity Recognition (NER) systems are commonly used in the construction of large biomedical knowledge graphs (KGs) from free text or non-standardized data. Their main role is to map biomedical entities to standardized identifiers in ontologies a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::18f7e190abcd3c27508cacce2b9b0bac
Autor:
Callahan, Tiffany J., Stefanski, Adrianne L., Wyrwa, Jordan M., Zeng, Chenjie, Ostropolets, Anna, Banda, Juan M., Baumgartner Jr., William A., Boyce, Richard D., Casiraghi, Elena, Coleman, Ben D., Collins, Janine H., Deakyne Davies, Sara J., Feinstein, James A., Lin, Asiyah Y., Martin, Blake, Matentzoglu, Nicolas A., Meeker, Daniella, Reese, Justin, Sinclair, Jessica, Taneja, Sanya B.
Publikováno v:
NPJ Digital Medicine; 5/19/2023, Vol. 6 Issue 1, p1-18, 18p
Autor:
Callahan, Tiffany J, Wyrwa, Jordan M, Baumgartner Jr, William A, Hunter, Lawrence E, Kahn, Michael G
This entry contains theslides that werepresented at the 2021Rocky Bioinformatics Conference (https://www.iscb.org/rocky2021).
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::84c6809252c05ce7c0f6b847b114edea
Autor:
Callahan, Tiffany J, Wyrwa, Jordan M, Baumgartner Jr, William A, Hunter, Lawrence E, Kahn, Michael G
This entry contains theabstract that was presented at the 2021Rocky Bioinformatics Conference (https://www.iscb.org/rocky2021).
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::771327a5ed2d47997f84fab0e3ab01a7
MotivationAlthough knowledge graphs (KGs) are used extensively in biomedical research to model complex phenomena, many KG construction methods remain largely unable to account for the use of different standardized terminologies or vocabularies, are o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::62e43bea9d210255fa0d631112553ffc
https://doi.org/10.1101/2020.04.30.071407
https://doi.org/10.1101/2020.04.30.071407