Zobrazeno 1 - 10
of 590
pro vyhledávání: '"B, Stadler"'
Autor:
Michael X. Wang, Esther G. Lou, Nicolae Sapoval, Eddie Kim, Prashant Kalvapalle, Bryce Kille, R. A. Leo Elworth, Yunxi Liu, Yilei Fu, Lauren B. Stadler, Todd J. Treangen
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-12 (2024)
Abstract Tiled amplicon sequencing has served as an essential tool for tracking the spread and evolution of pathogens. Over 15 million complete SARS-CoV-2 genomes are now publicly available, most sequenced and assembled via tiled amplicon sequencing.
Externí odkaz:
https://doaj.org/article/c670d790ce214a17bb6d50275f486f82
Autor:
Yunxi Liu, Nicolae Sapoval, Pilar Gallego-García, Laura Tomás, David Posada, Todd J. Treangen, Lauren B. Stadler
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-13 (2024)
Abstract Wastewater surveillance for SARS-CoV-2 provides early warnings of emerging variants of concerns and can be used to screen for novel cryptic linked-read mutations, which are co-occurring single nucleotide mutations that are rare, or entirely
Externí odkaz:
https://doaj.org/article/a7a3cb7b38de45c7a44e934759d246c0
Autor:
Katherine B. Ensor, Julia C. Schedler, Thomas Sun, Rebecca Schneider, Anthony Mulenga, Jingjing Wu, Lauren B. Stadler, Loren Hopkins
Publikováno v:
Scientific Reports, Vol 14, Iss 1, Pp 1-10 (2024)
Abstract Wastewater surveillance has proven a cost-effective key public health tool to understand a wide range of community health diseases and has been a strong source of information on community levels and spread for health departments throughout t
Externí odkaz:
https://doaj.org/article/d27195199c35435d8a3837a6875e972a
Publikováno v:
Basic and Clinical Andrology, Vol 33, Iss 1, Pp 1-10 (2023)
Abstract Background Cryptorchid boys with defective mini-puberty and impaired differentiation of Ad spermatogonia (high infertility risk) have altered expression of several genes encoding histone methyltransferases compared to patients with intact di
Externí odkaz:
https://doaj.org/article/91295b31d63845eba3ba385f0a6befae
Autor:
Sandra Kessler, Maryline Minoux, Onkar Joshi, Yousra Ben Zouari, Sebastien Ducret, Fiona Ross, Nathalie Vilain, Adwait Salvi, Joachim Wolff, Hubertus Kohler, Michael B. Stadler, Filippo M. Rijli
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-22 (2023)
Abstract Enhancer-promoter interactions preferentially occur within boundary-insulated topologically associating domains (TADs), limiting inter-TAD interactions. Enhancer clusters in linear proximity, termed super-enhancers (SEs), ensure high target
Externí odkaz:
https://doaj.org/article/e60e6bd64d4f4787a3c05f67bfcdbdd2
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-22 (2023)
Abstract Multiplexed assays of variant effect (MAVE) experimentally measure the effect of large numbers of sequence variants by selective enrichment of sequences with desirable properties followed by quantification by sequencing. mutscan is an R pack
Externí odkaz:
https://doaj.org/article/ea9c0ea77f814529833d13b0967dfccf
Autor:
Nicolae Sapoval, Yunxi Liu, Esther G. Lou, Loren Hopkins, Katherine B. Ensor, Rebecca Schneider, Lauren B. Stadler, Todd J. Treangen
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-7 (2023)
Abstract As clinical testing declines, wastewater monitoring can provide crucial surveillance on the emergence of SARS-CoV-2 variant of concerns (VoCs) in communities. In this paper we present QuaID, a novel bioinformatics tool for VoC detection base
Externí odkaz:
https://doaj.org/article/a04f1d64bced465dbcfc4f13cac50f51
Autor:
Marielle Hollstein, Mattheau Comerford, Michael Uhl, Michael Abel, Scott P. Egan, Lauren B. Stadler
Publikováno v:
Frontiers in Environmental Science, Vol 11 (2023)
Constructed Wetlands (CWs) are a cost-effective, versatile and sustainable choice for wastewater treatment. In these environments, microbial communities play a significant role in pollutant removal. However, little is known about how microbial commun
Externí odkaz:
https://doaj.org/article/271c6ba5982242be84dd5386341c2cbf
Publikováno v:
Basic and Clinical Andrology, Vol 31, Iss 1, Pp 1-13 (2021)
Résumé Le traitement par l’agoniste de l’hormone de libération des gonadotrophines (GnRHa) suite à une intervention chirurgicale pour cryptorchidie rétablit la mini-puberté par des effets endocrinologiques et transcriptionnels et prévient
Externí odkaz:
https://doaj.org/article/f999125d6192483aa2904eb9e8573199
Autor:
Federica Zilli, Pedro Marques Ramos, Priska Auf der Maur, Charly Jehanno, Atul Sethi, Marie‐May Coissieux, Tobias Eichlisberger, Loïc Sauteur, Adelin Rouchon, Laura Bonapace, Joana Pinto Couto, Roland Rad, Michael Rugaard Jensen, Andrea Banfi, Michael B Stadler, Mohamed Bentires‐Alj
Publikováno v:
EMBO Molecular Medicine, Vol 13, Iss 4, Pp 1-19 (2021)
Abstract Metastasis is the main cause of deaths related to solid cancers. Active transcriptional programmes are known to regulate the metastatic cascade but the molecular determinants of metastatic colonization remain elusive. Using an inducible pigg
Externí odkaz:
https://doaj.org/article/42ad8c50455f42c9bfe8d2e92e8ddc15