Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Axin Hua"'
Publikováno v:
iScience, Vol 27, Iss 1, Pp 108749- (2024)
Summary: Generating large-scale, high-fidelity sequencing data is challenging and, furthermore, not much has been done to characterize adjuvants’ effects at the repertoire level. Thus, we introduced an IgSeq pipeline that standardized library prep
Externí odkaz:
https://doaj.org/article/5594b508a7ee46cdaaeae4cedc008260
Autor:
Akshaya Ramesh, Sam Darko, Axin Hua, Glenn Overman, Amy Ransier, Joseph R. Francica, Ashley Trama, Georgia D. Tomaras, Barton F. Haynes, Daniel C. Douek, Thomas B. Kepler
Publikováno v:
Frontiers in Immunology, Vol 8 (2017)
The rhesus macaque is a critically important animal model in biomedical research, most recently playing a key role in the development of vaccines against human immunodeficiency virus-1. Nevertheless, the immunoglobulin (Ig) loci of macaques are as ye
Externí odkaz:
https://doaj.org/article/6335464dc6eb4094842e71d419596c78
High-throughput immunoglobulin sequencing (IgSeq) has been developed and applied to study the adaptive immune response extensively for more than a decade. However, generating large-scale, high-fidelity sequencing data is still challenging, and furthe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5635d86615fd47a760b6563314eb6136
https://doi.org/10.1101/2022.11.19.517218
https://doi.org/10.1101/2022.11.19.517218
Autor:
Claude Scarpelli, Thomas Schiex, Ghislaine Magdelenat, Michael K. Udvardi, Baifang Qin, Xinbin Dai, Jeff J. Doyle, Patrick X. Zhao, Hélène Bergès, Vagner A. Benedito, Arvind K. Bharti, Chrystel Gibelin, Dong-Hoon Jeong, Stéphane De Mita, Stephane Rombauts, Mingyi Wang, Nathalie Choisne, Simone L. Macmil, Patrick Wincker, Senjuti Sinharoy, Sylvie Samain, Christopher D. Town, Susan R. Singer, Heidrun Gundlach, Anne Berger, Jane Rogers, Kathrin Klee, Sarah Sims, Nevin D. Young, Stéphanie Fouteau, Claire Riddle, Iryna Sanders, John Gish, Limei Yang, René Geurts, Gregory D. May, Shiguo Zhou, Shweta Deshpande, David C. Schwartz, Anika Jöcker, Christine Nicholson, Ton Bisseling, Klaus F. X. Mayer, Antoine Zuber, Roxanne Denny, Chunting Lang, Carolien Franken, Douglas R. Cook, Ruihua Shi, Frédéric Debellé, Valérie Barbe, Giles E. D. Oldroyd, Foo Cheung, Lucy Matthews, Blake C. Meyers, Jeremy D. Murray, Dong-Jin Kim, Joann Mudge, Agnès Viollet, Heiko Schoof, Graham B. Wiley, Benjamin D. Rosen, Jean Dénarié, Florent Prion, Keqin Wang, Arnaud Bellec, Béatrice Segurens, Jeong Hwan Mun, Ernest F. Retzel, Sean Humphray, Andrew Farmer, D. Janine Sherrier, Lieven Sterck, Richard A. Dixon, Steven B. Cannon, Steve Kenton, Philippe Bardou, Alvaro J. González, Haibao Tang, Julie Poulain, Arnaud Couloux, Majesta O'Bleness, Pamela J. Green, Manuel Spannagl, Shelby L. Bidwell, Jixian Zhai, Asis Hallab, Anne Marie Dudez, Michael Bechner, Marina Naoumkina, James D. White, Francis Quetier, Marijke Hartog, Erin L. Monaghan, Charles Paule, Chunmei Qu, Andrew J. Severin, Céline Noirot, Fu Ying, Shaoping Lin, Ziyun Yao, Vivek Krishnakumar, Steven A. Goldstein, Axin Hua, Erika Sallet, Bing Bing Wang, Peng Zhou, Hongshing Lai, Yanbo Xing, Nicolas Samson, Jamison McCorrison, Doug White, Yi Jing, Olivier Saurat, Liping Zhou, Kevin A. T. Silverstein, Jean Weissenbach, Bruce A. Roe, Sebastian Proost, Yves Van de Peer, Xiaohong Wang, Jens Warfsmann, Jérôme Gouzy, Fares Z. Najar
Publikováno v:
Nature
Nature, 480, 520-524
Nature, Nature Publishing Group, 2011, 480 (7378), pp.520-524. ⟨10.1038/nature10625⟩
Nature 480 (2011)
Nature, 480, 520-524
Nature, Nature Publishing Group, 2011, 480 (7378), pp.520-524. ⟨10.1038/nature10625⟩
Nature 480 (2011)
Chantier qualité GA; International audience; Legumes (Fabaceae or Leguminosae) are unique among cultivated plants for their ability to carry out endosymbiotic nitrogen fixation with rhizobial bacteria, a process that takes place in a specialized str
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d1b9ac4fa4a0b85616643b6fec84f327
http://europepmc.org/articles/PMC3272368
http://europepmc.org/articles/PMC3272368
Autor:
Wilton B, Williams, Hua-Xin, Liao, M Anthony, Moody, Thomas B, Kepler, S Munir, Alam, Feng, Gao, Kevin, Wiehe, Ashley M, Trama, Kathryn, Jones, Ruijun, Zhang, Hongshuo, Song, Dawn J, Marshall, John F, Whitesides, Kaitlin, Sawatzki, Axin, Hua, Pinghuang, Liu, Matthew Z, Tay, Kelly E, Seaton, Xiaoying, Shen, Andrew, Foulger, Krissey E, Lloyd, Robert, Parks, Justin, Pollara, Guido, Ferrari, Jae-Sung, Yu, Nathan, Vandergrift, David C, Montefiori, Magdalena E, Sobieszczyk, Scott, Hammer, Shelly, Karuna, Peter, Gilbert, Doug, Grove, Nicole, Grunenberg, M Juliana, McElrath, John R, Mascola, Richard A, Koup, Lawrence, Corey, Gary J, Nabel, Cecilia, Morgan, Gavin, Churchyard, Janine, Maenza, Michael, Keefer, Barney S, Graham, Lindsey R, Baden, Georgia D, Tomaras, Barton F, Haynes
Publikováno v:
Science (New York, N.Y.). 349(6249)
An HIV-1 DNA prime vaccine, with a recombinant adenovirus type 5 (rAd5) boost, failed to protect from HIV-1 acquisition. We studied the nature of the vaccine-induced antibody (Ab) response to HIV-1 envelope (Env). HIV-1-reactive plasma Ab titers were
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::de9c4d699287a475b96d6e3b8b3afd44
https://pubmed.ncbi.nlm.nih.gov/26229114
https://pubmed.ncbi.nlm.nih.gov/26229114
Autor:
Bruce A. Roe, Hans de Jong, Jose Luis Goicoechea, James J. Giovannoni, Lorinda K. Anderson, Sandra Smit, Stephen M. Stack, Lindsay A. Shearer, Axin Hua
Publikováno v:
G3 : Genes Genomes Genetics 4 (2014) 8
G3 : Genes Genomes Genetics, 4(8), 1395-1405
G3: Genes|Genomes|Genetics
G3 : Genes Genomes Genetics, 4(8), 1395-1405
G3: Genes|Genomes|Genetics
The order and orientation (arrangement) of all 91 sequenced scaffolds in the 12 pseudomolecules of the recently published tomato (Solanum lycopersicum, 2n = 2x = 24) genome sequence were positioned based on marker order in a high-density linkage map.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cb83795769694867a256706dc8d8edfd
https://research.wur.nl/en/publications/fluorescence-in-situ-hybridization-and-optical-mapping-to-correct
https://research.wur.nl/en/publications/fluorescence-in-situ-hybridization-and-optical-mapping-to-correct
Autor:
James Lund, Axin Hua, Roger H. Reeves, Feng Chen, Bruce A. Roe, Beverly S. Emanuel, Marcia L. Budarf
Publikováno v:
Genomics. 63:374-383
Mouse genomic DNA sequence extending 634 kb on proximal mouse chromosome 16 was compared to the corresponding human sequence from chromosome 22q11.2. Haploinsufficiency for this region results in velocardiofacial syndrome (VCFS) in humans. The mouse
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::79d790bab988173adefdf761f22c726e
https://doi.org/10.1006/geno.1999.6044
https://doi.org/10.1006/geno.1999.6044
Publikováno v:
Genome Research. 9:53-61
The mnd2 mutation on mouse chromosome 6 produces a progressive neuromuscular disorder. To determine the gene content of the 400-kb mnd2 nonrecombinant region, we sequenced 108 kb of mouse genomic DNA and 92 kb of human genomic sequence from the corre
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::68f0db89dfc8fa4f46cb42c82b750554
https://doi.org/10.1101/gr.9.1.53
https://doi.org/10.1101/gr.9.1.53
Autor:
Laura Elnitski, David B. Jaffe, Jia Li, Marina Alexandersson, Michael J. Morgan, Shiaw Pyng Yang, Robert Baertsch, Claire M. Wade, John Tromp, Michael C. Zody, Terrence S. Furey, Emma Overton-Larty, Stephen D. Brown, Scott Schwartz, Diane M. Dunn, J. P. Leger, Kris A. Wetterstrand, David Torrents, Ratna Shownkeen, Brian Schultz, Kim C. Worley, Richard D. Emes, John Mayer, Tom Landers, Beverley Meredith, Carol Scott, R. J. Weber, Sean R. Eddy, David Kulp, Jun Kawai, J Bailey, Fan Hsu, Diana L. Kolbe, Kirsten McLay, Marc Botcherby, Richard Mott, Tracie L. Miner, Jill P. Mesirov, Cristyn Kells, Michael A. Quail, Melanie M. Wall, Alistair G. Rust, Josep F. Abril, Ian F Korf, Peter An, Roderic Guigó, Abel Ureta-Vidal, Evan Mauceli, L. Steven Johnson, Arian F.A. Smit, Arkadiusz Kasprzyk, Michael C. Wendl, Deanna M. Church, Francis S. Collins, Wayne N. Frankel, Pallavi Eswara, Bin Ma, Robert H. Waterston, Stylianos E. Antonarakis, Edward M. Rubin, John Douglas Mcpherson, Andrew Sheridan, Megan McCarthy, Ming Li, Colin N. Dewey, Justin Deri, Rosie Levine, Matthew Jones, Sheila Dodge, Richard R. Copley, Leo Goodstadt, Shan Yang, Donna Maglott, Jamey Wierzbowski, Nick Goldman, Evgeny M. Zdobnov, Simon G. Gregory, C M Clee, Steven Leonard, Elaine R. Mardis, Simon C. Potter, Sarah Sims, Richard A. Gibbs, Mark S. Guyer, Francesca Chiaromonte, Susan Lucas, Mark Diekhans, Steve Searle, Rachel Ainscough, Jane Peterson, Emmanouil T. Dermitzakis, Robert Nicol, Lucy Matthews, Guy Slater, Adam Felsenfeld, Karen Foley, Lucinda Fulton, Tim Hubbard, Richard K. Wilson, Deana W. LaHillier, W. Richard McCombie, Johanna Thompson, Robert David, John Attwood, Anthony P. West, Jane Rogers, Evan Keibler, Lisa Cook, Raju Kucherlapati, Steven Seaman, William E. Nash, Ian J. Jackson, Jonathan Singer, Axin Hua, Tina Graves, Ted Sharpe, Dudley Wyman, Bruce W. Birren, Stuart McLaren, David Willey, A Joy, Douglas Smith, Alexandre Reymond, Paul Flicek, Simon Cawley, Richa Agarwala, Diane Gage, Evanne Trevaskis, Ginger A. Fewell, Michael R. Brent, Tracy C. Ponce, W. James Kent, Timothy Holzer, Eduardo Eyras, Michael J. O’Connor, Webb Miller, Donna M. Muzny, Andrew von Niederhausern, Inna Dubchak, Eitan E. Winter, Catherine Ucla, Arne Stabenau, Michael N. Nhan, Piero Carninci, Michele Clamp, Pavel A. Pevzner, James Meldrim, Tim Cutts, R. D. Campbell, Joy Davies, Wratko Hlavina, Elinor K. Karlsson, David Haussler, John Burton, Peer Bork, Nicole Stange-Thomann, Mikita Suyama, Mark J. Daly, Ewan Birney, Edward J. Kulbokas, Craig Pohl, James C. Mullikin, Chad Nusbaum, Genís Parra, Jade P. Vinson, Yoshihide Hayashizaki, Sante Gnerre, Eric Berry, Daniel G. Brown, Asif T. Chinwalla, Emmanuel Mongin, Robert B. Weiss, Raymond Wheeler, Andrew Kirby, Yasushi Okazaki, Lior Pachter, Ross C. Hardison, Brian Spencer, Carol J. Bult, Joanne O. Nelson, Pankaj K. Agarwal, Darren Grafham, Gustavo Glusman, Thomas A. Jones, Glenn Tesler, Simon Whelan, James Cuff, Robert S. Fulton, K F Barlow, Jörg Schultz, Matthias S. Schwartz, Alex Poliakov, Jonathan Butler, Bruce A. Roe, Angela S. Hinrichs, Alan Coulson, Kate Montgomery, Eric D. Green, Stephan Beck, Val Curwen, Krishna M. Roskin, Robert W. Plumb, Chris P. Ponting, Ralph Santos, Victor Sapojnikov, Nicolas Bray, Kymberlie H. Pepin, Charles W. Sugnet, Olivier Couronne, Ivica Letunic, Sophie Williams, Kimberly D. Delehaunty, Kerstin Lindblad-Toh, Zemin Ning, Karen Oliver, Toby Bloom, Michael Kamal, Nicholas J. Dickens, Eric S. Lander, Christine Lloyd, Donna Karolchik, Adrienne Hunt
Publikováno v:
Nature, Vol. 420, No 6915 (2002) pp. 520-562
The sequence of the mouse genome is a key informational tool for understanding the contents of the human genome and a key experimental tool for biomedical research. Here, we report the results of an international collaboration to produce a high-quali
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3a37312d8c972e24a67353dfd5e2ad6f
http://ora.ox.ac.uk/objects/uuid:dab3ab6b-6c46-4eb2-822d-01887cdfba9f
http://ora.ox.ac.uk/objects/uuid:dab3ab6b-6c46-4eb2-822d-01887cdfba9f
Autor:
L. Song, D. M. Lloyd, R. M. Swann, Ian F Korf, Lucinda Fulton, Carol Soderlund, I. D. Martyn, A. King, W Burrill, H. Wu, Y. Ramsey, Tracy Rohlfing, Mark T. Ross, Robert S. Fulton, L. Spragon, Darek Kedra, Laurens G. Wilming, Lisa Edelmann, James G. R. Gilbert, L. Williams, L. Chu, K. Fleming, J. Burgess, S. Shaull, M. N. Whiteley, Phil Latreille, Y. Qian, Ian Dunham, Dan Layman, Jennifer Lewis, A. C.C. Wong, Nobuyoshi Shimizu, Noriaki Aoki, Melanie M. Wall, Margaret A. Leversha, Ingegerd Fransson, M. Vaudin, Takashi Sasaki, Bernice E. Morrow, Graeme T Clark, S. Lewis, S. M. Clegg, H. Ramsay, A M Kimberley, S. J. Dodsworth, Melvin I. Simon, Stephan Beck, D. Conroy, Joseph A. Murray, Michele Clamp, Jan P. Dumanski, Christine Lloyd, Joseph L. McClay, P. Hu, Genwei Zhang, Adrienne Hunt, Steve Kenton, Antony V. Cox, Tina Graves, T. Nguyen, Lesley J. Rogers, Kazuhiko Kawasaki, Luc J. Smink, C. Dockree, J. M. Fey, J. C. Davis, U. J. Kim, Nigel P. Carter, Philip Ozersky, R. W. Heathcott, Richard Durbin, Ai Shintani, J Bailey, S. Bourne, Feng Chen, Harminder Sehra, Sulagna C. Saitta, G. Hall-Tamlyn, Charmain L. Wright, A. A. Garner, T. Do, Jane Rogers, Rebekah Hall, Joseph A. Bedell, Shuichi Asakawa, K Bates, J P Almeida, C. Hall, R. Pavitt, Charlotte G. Cole, K. Hinds, N Corby, V. Cobley, D. Pearson, Beverly S. Emanuel, C. Odell, Carl E.G. Bruder, Darren Grafham, Hiroki Kurahashi, Cordelia Langford, Dave Willey, T. E. Wilmer, David R. Bentley, I. Tapia, Hiroaki Shizuya, Myriam Peyrard, Tamim H. Shaikh, J K Kershaw, F. Fang, LaDeana W. Hillier, P. Loh, C L Bagguley, Tim Hubbard, John Sulston, Z. Wang, Kazunori Shibuya, R. E. Collier, Melanie E. Goward, K F Barlow, Richard Bruskiewich, M. L. Budarf, Yuan Chen, Kathryn L. Evans, Sarah E. Hunt, Judy S. Crabtree, Benjamin Phillimore, Stuart McLaren, M Mashreghi-Mohammadi, S. Chissoe, D. Willingham, J. Hawkins, Huaqin Pan, Q. Wang, Michelle Smith, H. Bradshaw, C. Walker, C. D. Skuce, Jim White, Amanda McMurray, Lucy Matthews, John Burton, Patricia Wohldmann, G. Bemis, O. Beasley, Robert H. Waterston, David W. Johnson, Elaine R. Mardis, H. Williamson, D. Buck, Yuhang Wang, Andrew D. Ellington, Zijin Du, Eyal Seroussi, Susumu Mitsuyama, A. Wamsley, Joanne O. Nelson, Y. Yoshizaki, K. P. O'Brien, H. I. Lao, R. Connor, S. Smalley, Anne Bridgeman, R Ainscough, Matthew Jones, Elisabeth Dawson, Joanna Collins, Pawandeep Dhami, S. Holmes, S. Phan, L. Ray, Angela Dorman, O. T. McCann, Christine P. Bird, Sarah Milne, Q. Ren, B. J. Mortimore, Carol Scott, Lisa French, Shuk-Mei Ho, G. J. Coville, Richard K. Wilson, Patrick Minx, Ziyun Yao, Jun Kudoh, David Beare, Charles A. Steward, Hongshing Lai, Alexander Johnson, Scott M. Williams, Robert W. Plumb, M. Zhan, Y. Fu, A. V. Pearce, S. Blakey, D. Goela, Gavin K. Laird, N. Miller, Matt Cordes, Kymberlie H. Pepin, Sam Phillips, David Bentley, Stéphane Deschamps, A. Do, Shaoping Lin, Shinsei Minoshima, Bruce A. Roe, Axin Hua, S. Qi, C Carder, Paul Scheet, Mark Griffiths, A K Babbage, J. M. Wallis, Heather E. McDermid, Eda Malaj, D. Sloan, K. Kemp
Knowledge of the complete genomic DNA sequence of an organism allows a systematic approach to defining its genetic components. The genomic sequence provides access to the complete structures of all genes, including those without known function, their
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::26f2621f22d32f7520b63d5dea04c6cf
https://resolver.caltech.edu/CaltechAUTHORS:20150519-080603498
https://resolver.caltech.edu/CaltechAUTHORS:20150519-080603498