Genomic Surveillance of a Globally Circulating Distinct Group W Clonal Complex 11 Meningococcal Variant, New Zealand, 2013–2018

Autor: Zuyu Yang, Xiaoyun Ren, Heather Davies, Timothy Wood, Liza Lopez, Jill Sherwood, Audrey Tiong, Philip E. Carter

Publikováno v: Emerging Infectious Diseases, Vol 27, Iss 4, Pp 1087-1097 (2021)

Genomic surveillance is an essential part of effective disease control, enabling identification of emerging and expanding strains and monitoring of subsequent interventions. Whole-genome sequencing was used to analyze the genomic diversity of all Nei

Externí odkaz: https://doaj.org/article/46218c06f60c4190b964099f0c0f26c8

Comparative genomics of Bordetella pertussis isolates from New Zealand, a country with an uncommonly high incidence of whooping cough

Autor: Natalie Ring, Heather Davies, Julie Morgan, Maithreyi Sundaresan, Audrey Tiong, Andrew Preston, Stefan Bagby

Publikováno v: Ring, N, Davies, H, Morgan, J, Sundaresan, M, Tiong, A, Preston, A & Bagby, S 2022, ' Comparative genomics of Bordetella pertussis isolates from New Zealand, a country with an uncommonly high incidence of whooping cough ', Microbial Genomics, vol. 8, no. 1, MGEN000756 . https://doi.org/10.1099/mgen.0.000756

Whooping cough, the respiratory disease caused by Bordetella pertussis , has undergone a wide-spread resurgence over the last several decades. Previously, we developed a pipeline to assemble the repetitive B. pertussis genome into closed sequences us

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::76bd03ec898550dfe18cd08c661141e7
https://doi.org/10.1099/mgen.0.000756

The antimicrobial resistance landscape of

Autor: Christina, Straub, Callum, Thirkell, Audrey, Tiong, Rosemary, Woodhouse, Jenny, Szeto, Kristin H, Dyet

Publikováno v: Microbial Genomics

The increasing use of culture independent diagnostic testing for the diagnosis of Neisseria gonorrhoeae infection has led to gaps in surveillance of antimicrobial resistance (AMR) rates due to limited availability of cultures. Our study reports the f

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid________::f048c353d65deb5f5e82d393d352a7f3
https://pubmed.ncbi.nlm.nih.gov/34755593

Genome Typing and Epidemiology of Human Listeriosis in New Zealand, 1999 to 2018

Autor: Alexandra Moura, Lucia Rivas, Audrey Tiong, Brent Gilpin, Pierre-Yves Dupont, Beverley Horn, Shevaun Paine

Publikováno v: Journal of Clinical Microbiology
Journal of Clinical Microbiology, 2021, 59 (11), pp.e0084921. ⟨10.1128/JCM.00849-21⟩
J Clin Microbiol

This study describes the epidemiology of listeriosis in New Zealand between 1999 and 2018 as well as the retrospective whole-genome sequencing (WGS) of 453 Listeria monocytogenes isolates corresponding to 95% of the human cases within this period. Th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::449e7d03ff5e4f13bd4e9a588702606e
https://hal-pasteur.archives-ouvertes.fr/pasteur-03696060

Predictors of hospital surface contamination with Extended-spectrum β-lactamase-producing Escherichia coli and Klebsiella pneumoniae: patient and organism factors

Autor: Gary McAuliffe, Eva Gregory, Mary De Almeida, Jessica Nimmo, Audrey Tiong, Sally A Roberts, Joshua T. Freeman

Publikováno v: Antimicrobial Resistance and Infection Control

Background The role of the hospital environment in transmission of ESBL-Klebsiella pneumoniae (ESBL-KP) and ESBL-Escherichia coli (ESBL-EC) is poorly defined. Recent data however suggest that in the hospital setting, ESBL-KP is more transmissible tha

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e56e850fed6aa4863ed836ffbaa9309a
https://doi.org/10.1186/2047-2994-3-5