Zobrazeno 1 - 9
of 9
pro vyhledávání: '"Atsuko Miyawaki‐Kuwakado"'
Publikováno v:
Plants, People, Planet, Vol 6, Iss 6, Pp 1505-1521 (2024)
Societal Impact Statement The iconic Yoshino cherry tree in Japan is experiencing shifts in its blossom timing due to climate warming. To develop a genetically informed predictive model for bud dormancy release, we examined seasonal gene expression i
Externí odkaz:
https://doaj.org/article/4e39a4c9fce04d90b7f973ff6c5638cf
Autor:
Kosuke Tomimatsu, Yasuyuki Ohkawa, Kazumitsu Maehara, Takeru Fujii, Qianmei Wu, Akihito Harada, Atsuko Miyawaki-Kuwakado
Publikováno v:
Genes to Cells. 26:530-540
Single-cell RNA-sequencing analysis is one of the most effective tools for understanding specific cellular states. The use of single cells or pooled cells in RNA-seq analysis requires the isolation of cells from a tissue or culture. Although trypsin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2b475aa45b58945e63244a8ea4532461
https://doi.org/10.1111/gtc.12870
https://doi.org/10.1111/gtc.12870
Autor:
Qianmei Wu, Kosuke Tokunaga, Atsuko Miyawaki-Kuwakado, Wakana Izumi, Kosuke Tomimatsu, Ryuichi Tatsumi, Mako Nakamura, Takahiro Suzuki, Alaa Elgaabari
Publikováno v:
The Journal of Biochemistry. 170:107-117
Although skeletal muscle cells and adipocytes are derived from the same mesoderm, they do not transdifferentiate in vivo and are strictly distinct at the level of gene expression. To elucidate some of the regulatory mechanisms underlying this strict
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c8277120e31c7461fc0565a5638c6443
https://doi.org/10.1093/jb/mvab030
https://doi.org/10.1093/jb/mvab030
Autor:
Sushil Bhandari, KwangHeum Hong, Atsuko Miyawaki-Kuwakado, Kosuke Tomimatsu, Yong-Il Kim, In-Koo Nam, Charles G Sagerström, Mako Nakamura, Seong-Kyu Choe
Publikováno v:
Journal of biochemistry.
The Nudt family has been identified as enzymes performing Coenzyme A to 3′5′-ADP + 4′-phospho pantetheine catalysis. The members of this family have been shown to be particularly involved in lipid metabolism, while their involvement in gene reg
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::47a2625099bf6d8b0676a46f892b6b38
https://pubmed.ncbi.nlm.nih.gov/36270274
https://pubmed.ncbi.nlm.nih.gov/36270274
Publikováno v:
IEEE/ACM Transactions on Computational Biology and Bioinformatics. 17:27-36
The calculation of steady-state metabolite concentrations in metabolic reaction network models is the first step in the sensitivity analysis of a metabolic reaction system described by differential equations. However, this calculation becomes very di
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d8988e9cadcb62d33ab90ec247361052
https://doi.org/10.1109/tcbb.2018.2853724
https://doi.org/10.1109/tcbb.2018.2853724
Autor:
Seiya Hirai, Kosuke Tomimatsu, Atsuko Miyawaki-Kuwakado, Yoshimasa Takizawa, Tetsuro Komatsu, Taro Tachibana, Yutaro Fukushima, Yasuko Takeda, Lumi Negishi, Tomoya Kujirai, Masako Koyama, Yasuyuki Ohkawa, Hitoshi Kurumizaka
Publikováno v:
Nucleic acids research. 50(1)
Histone H3mm18 is a non-allelic H3 variant expressed in skeletal muscle and brain in mice. However, its function has remained enigmatic. We found that H3mm18 is incorporated into chromatin in cells with low efficiency, as compared to H3.3. We determi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ed1c11750057b90f07bd6b51ff4b6f73
https://pubmed.ncbi.nlm.nih.gov/34929737
https://pubmed.ncbi.nlm.nih.gov/34929737
Autor:
Atsuko Miyawaki-Kuwakado, Tokuko Haraguchi, Yasuyuki Ohkawa, Chikashi Obuse, Hiroshi Kimura, Yasushi Hiraoka, Yasuhiro Hirano, Yoko Hayashi-Takanaka, Yuichiro Hayashi
Publikováno v:
Nucleic Acids Research
DNA replication is a key step in initiating cell proliferation. Loading hexameric complexes of minichromosome maintenance (MCM) helicase onto DNA replication origins during the G1 phase is essential for initiating DNA replication. Here, we examined M
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b9556871c47fae418113b0a65412d3fb
https://pubmed.ncbi.nlm.nih.gov/34817054
https://pubmed.ncbi.nlm.nih.gov/34817054
Autor:
Akihito Harada, Qianmei Wu, Kazumitsu Maehara, Kosuke Tomimatsu, Masatoshi Fujita, Takeru Fujii, Atsuko Miyawaki-Kuwakado, Yasuyuki Ohkawa
Publikováno v:
Journal of biochemistry. 169(6)
MyoD, a myogenic differentiation protein, has been studied for its critical role in skeletal muscle differentiation. MyoD-expressing myoblasts have a potency to be differentiated with proliferation of ectopic cells. However, little is known about the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8896455baaf86757c2dfc40881330ec0
https://pubmed.ncbi.nlm.nih.gov/33479729
https://pubmed.ncbi.nlm.nih.gov/33479729
Publikováno v:
Mathematical Biosciences. 301:21-31
In a mathematical model, estimation of parameters from time-series data of metabolic concentrations in cells is a challenging task. However, it seems that a promising approach for such estimation has not yet been established. Biochemical Systems Theo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0c5d73a44a4473ae69c1a5f2aaffc6db
https://doi.org/10.1016/j.mbs.2018.01.010
https://doi.org/10.1016/j.mbs.2018.01.010