Software comparison for evaluating genomic copy number variation for Affymetrix 6.0 SNP array platform

Autor: Kardia Sharon LR, Maharjan Sooraj, Atkinson Elizabeth J, Eckel-Passow Jeanette E, de Andrade Mariza

Publikováno v: BMC Bioinformatics, Vol 12, Iss 1, p 220 (2011)

Abstract Background Copy number data are routinely being extracted from genome-wide association study chips using a variety of software. We empirically evaluated and compared four freely-available software packages designed for Affymetrix SNP chips t

Externí odkaz: https://doaj.org/article/2a2afae82877480ba7b26f085c534f7c

Retrospective study of laboratory-based surveillance of rabies in wild and domestic animals in the southern United States, 2010-2021.

Autor: Ilha MRS; Tifton Veterinary Diagnostic and Investigational Laboratory, University of Georgia, Tifton, GA, USA., Dawson KA; Abraham Baldwin Agricultural College, Tifton, GA, USA., Atkinson EL; Abraham Baldwin Agricultural College, Tifton, GA, USA., Graham EA; Tifton Veterinary Diagnostic and Investigational Laboratory, University of Georgia, Tifton, GA, USA., Woldemeskel MW; Tifton Veterinary Diagnostic and Investigational Laboratory, University of Georgia, Tifton, GA, USA., C Mosley YY; Tifton Veterinary Diagnostic and Investigational Laboratory, University of Georgia, Tifton, GA, USA., Coarsey MD; Tifton Veterinary Diagnostic and Investigational Laboratory, University of Georgia, Tifton, GA, USA., Naikare HK; Tifton Veterinary Diagnostic and Investigational Laboratory, University of Georgia, Tifton, GA, USA.

Publikováno v: Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc [J Vet Diagn Invest] 2024 Jul; Vol. 36 (4), pp. 554-559. Date of Electronic Publication: 2024 May 14.

A fragment-based approach leading to the discovery of inhibitors of CK2α with a novel mechanism of action.

Autor: Brear P; Department of Biochemistry, University of Cambridge Tennis Court Road CB2 1GA Cambridge UK mh256@cam.ac.uk., De Fusco C; Yusuf Hamied Department of Chemistry, University of Cambridge Lensfield Road CB2 1EW Cambridge UK spring@ch.cam.ac.uk., Atkinson EL; Yusuf Hamied Department of Chemistry, University of Cambridge Lensfield Road CB2 1EW Cambridge UK spring@ch.cam.ac.uk., Iegre J; Yusuf Hamied Department of Chemistry, University of Cambridge Lensfield Road CB2 1EW Cambridge UK spring@ch.cam.ac.uk., Francis-Newton NJ; Medical Research Council Cancer Unit, University of Cambridge, Hutchison/MRC Research Centre Cambridge CB2 0XZ UK., Venkitaraman AR; Medical Research Council Cancer Unit, University of Cambridge, Hutchison/MRC Research Centre Cambridge CB2 0XZ UK.; Cancer Science Institute of Singapore, National University of Singapore 14 Medical Drive, Singapore 117599 & DITL, IMCB, ASTAR, 8A Biomedical Grove 138648 Singapore., Hyvönen M; Department of Biochemistry, University of Cambridge Tennis Court Road CB2 1GA Cambridge UK mh256@cam.ac.uk., Spring DR; Yusuf Hamied Department of Chemistry, University of Cambridge Lensfield Road CB2 1EW Cambridge UK spring@ch.cam.ac.uk.

Publikováno v: RSC medicinal chemistry [RSC Med Chem] 2022 Sep 16; Vol. 13 (11), pp. 1420-1426. Date of Electronic Publication: 2022 Sep 16 (Print Publication: 2022).

Chemical probes targeting the kinase CK2: a journey outside the catalytic box.

Autor: Iegre J; Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK. spring@ch.cam.ac.uk., Atkinson EL; Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK. spring@ch.cam.ac.uk., Brear PD; Department of Biochemistry, University of Cambridge, 80 Tennis Court Road, Cambridge, CB2 1GA, UK., Cooper BM; Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK. spring@ch.cam.ac.uk., Hyvönen M; Department of Biochemistry, University of Cambridge, 80 Tennis Court Road, Cambridge, CB2 1GA, UK., Spring DR; Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK. spring@ch.cam.ac.uk.

Publikováno v: Organic & biomolecular chemistry [Org Biomol Chem] 2021 May 26; Vol. 19 (20), pp. 4380-4396.

Efficient development of stable and highly functionalised peptides targeting the CK2α/CK2β protein-protein interaction.

Autor: Iegre J; Department of Chemistry , University of Cambridge , Lensfield Road , CB2 1EW , Cambridge , UK . Email: spring@ch.cam.ac.uk., Brear P; Department of Biochemistry , University of Cambridge , Tennis Court Road , CB2 1GA , Cambridge , UK . Email: mh256@cam.ac.uk., Baker DJ; Discovery Sciences , IMED Biotech Unit , AstraZeneca , Cambridge , UK., Tan YS; Bioinformatics Institute , Agency for Science, Technology and Research (ASTAR) , 30 Biopolis Street, #07-01 Matrix , Singapore 138671., Atkinson EL; Department of Chemistry , University of Cambridge , Lensfield Road , CB2 1EW , Cambridge , UK . Email: spring@ch.cam.ac.uk., Sore HF; Department of Chemistry , University of Cambridge , Lensfield Road , CB2 1EW , Cambridge , UK . Email: spring@ch.cam.ac.uk., O' Donovan DH; Oncology, IMED Biotech Unit , AstraZeneca , Cambridge , UK., Verma CS; Bioinformatics Institute , Agency for Science, Technology and Research (ASTAR) , 30 Biopolis Street, #07-01 Matrix , Singapore 138671.; Department of Biological Sciences , National University of Singapore , 14 Science Drive 4 , Singapore 117543.; School of Biological Sciences , Nanyang Technological University , 60 Nanyang Drive , Singapore 637551., Hyvönen M; Department of Biochemistry , University of Cambridge , Tennis Court Road , CB2 1GA , Cambridge , UK . Email: mh256@cam.ac.uk., Spring DR; Department of Chemistry , University of Cambridge , Lensfield Road , CB2 1EW , Cambridge , UK . Email: spring@ch.cam.ac.uk.

Publikováno v: Chemical science [Chem Sci] 2019 Apr 12; Vol. 10 (19), pp. 5056-5063. Date of Electronic Publication: 2019 Apr 12 (Print Publication: 2019).