Zobrazeno 1 - 10
of 36
pro vyhledávání: '"Assaf, Zemach"'
Autor:
Ofir Griess, Katherine Domb, Aviva Katz, Keith D Harris, Karina G Heskiau, Nir Ohad, Assaf Zemach
Publikováno v:
PLoS ONE, Vol 18, Iss 3, p e0279688 (2023)
The Snf2 chromatin remodeler, DECREASE IN DNA METHYLATION 1 (DDM1) facilitates DNA methylation. In flowering plants, DDM1 mediates methylation in heterochromatin, which is targeted primarily by MET1 and CMT methylases and is necessary for silencing t
Externí odkaz:
https://doaj.org/article/fcf25b25b85944c28f5226ee66398bb1
Autor:
Keith D. Harris, Assaf Zemach
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-19 (2020)
Abstract Cytosine methylome data is commonly generated through next-generation sequencing, with analyses averaging methylation states of individual reads. We propose an alternative method of analysing single-read methylome data. Using this method, we
Externí odkaz:
https://doaj.org/article/df7b9f5763534b158af35bbf268831ff
Publikováno v:
Epigenetics & Chromatin, Vol 12, Iss 1, Pp 1-18 (2019)
Abstract Background DNA methylation of active genes, also known as gene body methylation, is found in many animal and plant genomes. Despite this, the transcriptional and developmental role of such methylation remains poorly understood. Here, we expl
Externí odkaz:
https://doaj.org/article/6b6a052b1fe84a098f07b924941af5bf
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-10 (2019)
Whether plants have true DNMT3 orthologs and their role in establishing DNA methylation are still unclear. Here, the authors show that DNMT3s are persistent through plant evolution and mediates both de novo and heterochromatin DNA methylation in the
Externí odkaz:
https://doaj.org/article/69184ce98d12440fbcf00c0d35873812
Publikováno v:
Epigenetics & Chromatin, Vol 11, Iss 1, Pp 1-12 (2018)
Abstract Background The Chromomethylase 1 (CMT1) has long been considered a nonessential gene because, in certain Arabidopsis ecotypes, the CMT1 gene is disrupted by the Evelknievel (EK) retroelement, inserted within exon 13, or contains frameshift m
Externí odkaz:
https://doaj.org/article/369f99441e2f4591a0df1dd43239130b
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-2 (2019)
The original version of this Article contained an error in Fig. 5, in which the evolutionary origin of DRM2 was incorrectly placed prior to the divergence between gymnosperms and angiosperms . The correct evolutionary origin of DRM2 should be in angi
Externí odkaz:
https://doaj.org/article/7e8da7bfbff84e63be552dfa3935950a
Autor:
Assaf Zemach, Katherine Domb, Efrat Kaisler, Keith D. Harris, Nir Ohad, Uyen V. T. Hong, Rafael Yaari, Vu H. Nguyen, Aviva Katz, Ofir Griess, Karina G. Heskiau
Publikováno v:
Proceedings of the National Academy of Sciences. 117:33700-33710
Cytosine (DNA) methylation in plants regulates the expression of genes and transposons. While methylation in plant genomes occurs at CG, CHG, and CHH sequence contexts, the comparative roles of the individual methylation contexts remain elusive. Here
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a26c79300800465b47e3b12822c2e9d3
https://doi.org/10.1073/pnas.2011361117
https://doi.org/10.1073/pnas.2011361117
Publikováno v:
Epigenetics & Chromatin, Vol 12, Iss 1, Pp 1-18 (2019)
Epigenetics & Chromatin
Epigenetics & Chromatin
Background DNA methylation of active genes, also known as gene body methylation, is found in many animal and plant genomes. Despite this, the transcriptional and developmental role of such methylation remains poorly understood. Here, we explore the d
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e1345946604a65d4b22fa652b5f5448d
http://link.springer.com/article/10.1186/s13072-019-0307-4
http://link.springer.com/article/10.1186/s13072-019-0307-4
Autor:
Katherine, Domb, Aviva, Katz, Keith D, Harris, Rafael, Yaari, Efrat, Kaisler, Vu H, Nguyen, Uyen V T, Hong, Ofir, Griess, Karina G, Heskiau, Nir, Ohad, Assaf, Zemach
Publikováno v:
Proc Natl Acad Sci U S A
Cytosine (DNA) methylation in plants regulates the expression of genes and transposons. While methylation in plant genomes occurs at CG, CHG, and CHH sequence contexts, the comparative roles of the individual methylation contexts remain elusive. Here
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::190a6d2f810d8b31782bf46811b57caf
https://pubmed.ncbi.nlm.nih.gov/33376225
https://pubmed.ncbi.nlm.nih.gov/33376225
Autor:
Assaf Zemach, Keith D. Harris
Publikováno v:
Genome Biology
Genome Biology, Vol 21, Iss 1, Pp 1-19 (2020)
Genome Biology, Vol 21, Iss 1, Pp 1-19 (2020)
Cytosine methylome data is commonly generated through next-generation sequencing, with analyses averaging methylation states of individual reads. We propose an alternative method of analysing single-read methylome data. Using this method, we identify
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::169c18305ff4013c304caff4712e760c
http://europepmc.org/articles/PMC7412668
http://europepmc.org/articles/PMC7412668