Zobrazeno 1 - 10 of 122 pro vyhledávání: '"Asim K, Bej"'
1
Akademický článek
High-throughput amplicon sequencing datasets of coastal sediments from three locations of the Gulf of Mexico, USA
Autor: George B.H. Green, Angelo DePaola, Jason G. Linville, Casey D. Morrow, Asim K. Bej
Publikováno v: Data in Brief, Vol 47, Iss , Pp 108895- (2023)
We present high-throughput amplicon sequence (HTS) datasets of the purified microbial metacommunity DNA of coastal surface sediments from Portersville Bay (PVB) (n = 3), Bayou La Batre (BLB) (n = 3), and Mobile Bay (MOB) (n = 3) of the U.S. Gulf of M
Externí odkaz: https://doaj.org/article/ddb0db4e15124420bea4cab914d4ed9f
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2
Akademický článek
Microbial Composition and Genes for Key Metabolic Attributes in the Gut Digesta of Sea Urchins Lytechinus variegatus and Strongylocentrotus purpuratus Using Shotgun Metagenomics
Autor: Joseph A. Hakim, George B. H. Green, Stephen A. Watts, Michael R. Crowley, Casey D. Morrow, Asim K. Bej
Publikováno v: Current Issues in Molecular Biology, Vol 43, Iss 2, Pp 978-995 (2021)
This paper describes the microbial community composition and genes for key metabolic genes, particularly the nitrogen fixation of the mucous-enveloped gut digesta of green (Lytechinus variegatus) and purple (Strongylocentrotus purpuratus) sea urchins
Externí odkaz: https://doaj.org/article/5c1b199b43c547e89d88d61d05b3a331
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3
Akademický článek
High-throughput amplicon sequencing datasets of the metacommunity DNA of the gut microbiota of Zebrafish Danio rerio fed diets with differential quantities of protein and fat contents
Autor: George B. H. Green, Michael B. Williams, Sophie B. Chehade, Casey D. Morrow, Stephen A. Watts, Asim K. Bej
Publikováno v: Data in Brief, Vol 42, Iss , Pp 108313- (2022)
In this paper, we present high-throughput amplicon sequence (HTS) datasets of the gut microbiota of male and female Zebrafish Danio rerio fed diets consisting of sub-optimal and above-optimal quantities of proteins and fats. The HTS datasets were gen
Externí odkaz: https://doaj.org/article/df119dcadca849f7a393285a90655d45
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4
Akademický článek
High-throughput amplicon sequencing datasets of the metacommunity DNA of the gut microbiota of naturally occurring and laboratory aquaculture green sea urchins Lytechinus variegatus
Autor: Joseph A. Hakim, Casey D. Morrow, Stephen A. Watts, Asim K. Bej
Publikováno v: Data in Brief, Vol 26, Iss , Pp - (2019)
We present high-throughput amplicon sequence (HTS) datasets of the microbial metacommunity DNA of the gut tissue and the gut digesta of naturally occurring (n = 3) and laboratory aquaculture (n = 2) green sea urchins, Lytechinus variegatus. The HTS d
Externí odkaz: https://doaj.org/article/77d97d81823648f9872cf9afdd70567e
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5
Akademický článek
Metagenomic data of the bacterial community in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252)
Autor: Hyunmin Koo, Asim K. Bej
Publikováno v: Data in Brief, Vol 6, Iss , Pp 89-93 (2016)
The data in this article includes the sequences of bacterial 16S rRNA gene from metagenome of Macondo oil (MC252)-treated and non-oil-treated sediment microcosms, collected from coastal Gulf of Mexico and Bayou La Batre, USA. Metacommunity DNA was PC
Externí odkaz: https://doaj.org/article/c877d8e73f124731acb624f301d4416b
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6
Microbial Composition and Genes for Key Metabolic Attributes in the Gut Digesta of Sea Urchins Lytechinus variegatus and Strongylocentrotus purpuratus Using Shotgun Metagenomics
Autor: Casey D. Morrow, Asim K. Bej, George B. H. Green, Stephen A. Watts, Michael R. Crowley, Joseph A. Hakim
Publikováno v: Current Issues in Molecular Biology
Volume 43
Issue 2
Pages 70-995
Current Issues in Molecular Biology, Vol 43, Iss 70, Pp 978-995 (2021)
This paper describes the microbial community composition and genes for key metabolic genes, particularly the nitrogen fixation of the mucous-enveloped gut digesta of green (Lytechinus variegatus) and purple (Strongylocentrotus purpuratus) sea urchins
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eaeada5e66b645d3d4d0d7a1f62658a7
https://doi.org/10.3390/cimb43020070
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7
Akademický článek
Microbial Communities and Their Predicted Metabolic Functions in Growth Laminae of a Unique Large Conical Mat from Lake Untersee, East Antarctica
Autor: Hyunmin Koo, Nazia Mojib, Joseph A. Hakim, Ian Hawes, Yukiko Tanabe, Dale T. Andersen, Asim K. Bej
Publikováno v: Frontiers in Microbiology, Vol 8 (2017)
In this study, we report the distribution of microbial taxa and their predicted metabolic functions observed in the top (U1), middle (U2), and inner (U3) decadal growth laminae of a unique large conical microbial mat from perennially ice-covered Lake
Externí odkaz: https://doaj.org/article/ec6a34abcdc147859ffda5c31298d092
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8
Akademický článek
The Purple Sea Urchin Strongylocentrotus purpuratus Demonstrates a Compartmentalization of Gut Bacterial Microbiota, Predictive Functional Attributes, and Taxonomic Co-Occurrence
Autor: Joseph A. Hakim, Julie B. Schram, Aaron W. E. Galloway, Casey D. Morrow, Michael R. Crowley, Stephen A. Watts, Asim K. Bej
Publikováno v: Microorganisms, Vol 7, Iss 2, p 35 (2019)
The sea urchin Strongylocentrotus purpuratus (order Camarodonta, family Strongylocentrotidae) can be found dominating low intertidal pool biomass on the southern coast of Oregon, USA. In this case study, three adult sea urchins were collected from th
Externí odkaz: https://doaj.org/article/253d9af8f93b483cb1041dab571c05aa
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9
Akademický článek
Metagenomic Analysis of Microbial Community Compositions and Cold-Responsive Stress Genes in Selected Antarctic Lacustrine and Soil Ecosystems
Autor: Hyunmin Koo, Joseph A. Hakim, Casey D. Morrow, Michael R. Crowley, Dale T. Andersen, Asim K. Bej
Publikováno v: Life, Vol 8, Iss 3, p 29 (2018)
This study describes microbial community compositions, and various cold-responsive stress genes, encompassing cold-induced proteins (CIPs) and cold-associated general stress-responsive proteins (CASPs) in selected Antarctic lake water, sediment, and
Externí odkaz: https://doaj.org/article/c648d3adb77549a8b2c65f39ee3af556
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10
The Gut Microbiota of Naturally Occurring and Laboratory Aquaculture Lytechinus variegatus Revealed Differences in the Community Composition, Taxonomic Co-Occurrence, and Predicted Functional Attributes
Autor: Asim K. Bej, Joseph A. Hakim, George B. H. Green, Hyunmin Koo, Casey D. Morrow, Stephen A. Watts, Jiung-Wen Chen
Publikováno v: Applied Microbiology
Volume 1
Issue 2
Pages 16-224
Sea urchins, in many instances, are collected from the wild, maintained in the laboratory aquaculture environment, and used as model animals for various scientific investigations. It has been increasingly evident that diet-driven dysbiosis of the gut
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9b8f1f7934a81ae0d99f8aaed27a4017
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