Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Ashley R Bate"'
Autor:
Mónica Serrano, JinXin Gao, João Bota, Ashley R Bate, Jeffrey Meisner, Patrick Eichenberger, Charles P Moran, Adriano O Henriques
Publikováno v:
PLoS Genetics, Vol 11, Iss 4, p e1005104 (2015)
Gene expression during spore development in Bacillus subtilis is controlled by cell type-specific RNA polymerase sigma factors. σFand σE control early stages of development in the forespore and the mother cell, respectively. When, at an intermediat
Externí odkaz:
https://doaj.org/article/0ffd8646a6284c34977283ecea34f699
Autor:
Ashley R. Bate, Richard L. Gourse, Daniel B. Kearns, Patrick Eichenberger, Jared T. Winkelman, Anna C. Bree
Publikováno v:
Molecular Microbiology. 88:984-997
Biofilm formation in Bacillus subtilis requires expression of the eps and tapA-sipW-tasA operons to synthesize the extracellular matrix components, extracellular polysaccharide and TasA amyloid proteins, respectively. Expression of both operons is in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::80af9c1ddae05a151fbc7a80a79d6a77
https://doi.org/10.1111/mmi.12235
https://doi.org/10.1111/mmi.12235
Autor:
Andrew M. Phillips, Ashley R. Bate, Loralyn M. Cozy, Richard Bonneau, Yi Huang Hsueh, Daniel B. Kearns, Rebecca A. Calvo, Patrick Eichenberger
Publikováno v:
Molecular Microbiology. 83:1210-1228
Exponentially growing Bacillus subtilis cultures are epigenetically differentiated into two subpopulations in which cells are either ON or OFF for σ(d) -dependent gene expression: a pattern suggestive of bistability. The gene encoding σ(D) , sigD,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::402ee92712e31c9bd90fb4f389d69d24
https://doi.org/10.1111/j.1365-2958.2012.08003.x
https://doi.org/10.1111/j.1365-2958.2012.08003.x
An experimentally supported model of the Bacillus subtilis global transcriptional regulatory network
Autor:
Thadeous Kacmarczyk, Samantha N. Barry, Tsutomu Sato, Bentley Shuster, David Z. Rudner, Christoph Hafemeister, Brian Liu, Matthew Gallitto, Christopher D. A. Rodrigues, Mario L. Arrieta-Ortiz, Ashley R. Bate, Timothy Chu, Patrick Eichenberger, Francis J. Santoriello, Adam Driks, Jie Chen, Alex Greenfield, Richard Bonneau
Publikováno v:
Molecular Systems Biology
Organisms from all domains of life use gene regulation networks to control cell growth, identity, function, and responses to environmental challenges. Although accurate global regulatory models would provide critical evolutionary and functional insig
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e9793ec950f9fb0d0662688f15e50a2d
https://doi.org/10.15252/msb.20156236
https://doi.org/10.15252/msb.20156236
Publikováno v:
The Bacterial Spore
Endospore-forming bacteria, with Bacillus subtilis being the prevalent model organism, belong to the phylum Firmicutes. Although the last common ancestor of all Firmicutes is likely to have been an endospore-forming species, not every lineage in the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b3c16f7c71680e711f143012cf7cf24c
https://pubmed.ncbi.nlm.nih.gov/26105826
https://pubmed.ncbi.nlm.nih.gov/26105826
Autor:
Patrick Eichenberger, Ashley R. Bate, João Bota, Adriano O. Henriques, Charles P. Moran, Mónica Serrano, JinXin X. Gao, Jeffrey Meisner
Publikováno v:
PLoS Genetics, Vol 11, Iss 4, p e1005104 (2015)
PLoS Genetics
PLoS Genetics
Gene expression during spore development in Bacillus subtilis is controlled by cell type-specific RNA polymerase sigma factors. σFand σE control early stages of development in the forespore and the mother cell, respectively. When, at an intermediat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d7f5e2feb5e5b954747680ea8ceabb51
http://europepmc.org/articles/PMC4383634?pdf=render
http://europepmc.org/articles/PMC4383634?pdf=render
Autor:
Loralyn M, Cozy, Andrew M, Phillips, Rebecca A, Calvo, Ashley R, Bate, Yi-Huang, Hsueh, Richard, Bonneau, Patrick, Eichenberger, Daniel B, Kearns
Publikováno v:
Molecular microbiology. 83(6)
Exponentially growing Bacillus subtilis cultures are epigenetically differentiated into two subpopulations in which cells are either ON or OFF for σ(d) -dependent gene expression: a pattern suggestive of bistability. The gene encoding σ(D) , sigD,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::cbc09e1143a4d11ac1fdf6a1c219f3d5
https://pubmed.ncbi.nlm.nih.gov/22329926
https://pubmed.ncbi.nlm.nih.gov/22329926
Publikováno v:
PLoS Computational Biology
PLoS Computational Biology, Vol 7, Iss 12, p e1002228 (2011)
PLoS Computational Biology, Vol 7, Iss 12, p e1002228 (2011)
The increasing abundance of large-scale, high-throughput datasets for many closely related organisms provides opportunities for comparative analysis via the simultaneous biclustering of datasets from multiple species. These analyses require a reformu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dd9b7bfe3fc7e1ce35e4f70b104a7517
https://pubmed.ncbi.nlm.nih.gov/22144874
https://pubmed.ncbi.nlm.nih.gov/22144874
Autor:
Thadeous Kacmarczyk, Ashley R. Bate, Daniel B. Kearns, David J Reiss, Patrick Eichenberger, Richard Bonneau, Peter Waltman
Publikováno v:
Genome Biology
We describe an algorithm, multi-species cMonkey, for the simultaneous biclustering of heterogeneous multiple-species data collections and apply the algorithm to a group of bacteria containing Bacillus subtilis, Bacillus anthracis, and Listeria monocy
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5f9a37f5df04e1bc7dd8ae121d1fc918
https://doi.org/10.1186/gb-2010-11-9-r96
https://doi.org/10.1186/gb-2010-11-9-r96