Recent methods from statistical inference and machine learning to improve integrative modeling of macromolecular assemblies

Autor: Arvindekar, Shreyas, Majila, Kartik, Viswanath, Shruthi

Integrative modeling of macromolecular assemblies allows for structural characterization of large assemblies that are recalcitrant to direct experimental observation. A Bayesian inference approach facilitates combining data from complementary experim

Externí odkaz: http://arxiv.org/abs/2401.17894

An integrated structural model of the DNA damage-responsive H3K4me3 binding WDR76:SPIN1 complex with the nucleosome.

Autor: Xingyu Liu, Ying Zhang, Zhihui Wen, Yan Hao, Banks, Charles A. S., Cesare, Joseph, Bhattacharya, Saikat, Arvindekar, Shreyas, Lange, Jeffrey J., Yixuan Xie, Garcia, Benjamin A., Slaughter, Brian D., Unruh, Jay R., Viswanath, Shruthi, Florens, Laurence, Workman, Jerry L., Washburn, Michael P.

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America; 8/13/2024, Vol. 121 Issue 33, p1-12, 42p

Review of Comparison of urine proteomes from tumor-bearing mice with those from tumor-resected mice

Autor: Arvindekar, Shreyas

This Zenodo record is a permanently preserved version of a PREreview. You can view the complete PREreview at https://prereview.org/reviews/6781847. Heng Ziqi et al have asked a basic question about differentiating between the individuals with complet

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::f240cd80463e8293610ea3cb568a5b94

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An integrated structural model of the DNA damage-responsive H3K4me3 binding WDR76:SPIN1 complex with the nucleosome.

Autor: Liu X; Stowers Institute for Medical Research, Kansas City, MO 64110., Zhang Y; Stowers Institute for Medical Research, Kansas City, MO 64110., Wen Z; Stowers Institute for Medical Research, Kansas City, MO 64110., Hao Y; Stowers Institute for Medical Research, Kansas City, MO 64110., Banks CAS; Stowers Institute for Medical Research, Kansas City, MO 64110., Cesare J; Stowers Institute for Medical Research, Kansas City, MO 64110.; Medical Scientist Training Program, Department of Cancer Biology, University of Kansas Medical Center, Kansas City, KS 66150., Bhattacharya S; Stowers Institute for Medical Research, Kansas City, MO 64110., Arvindekar S; National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India., Lange JJ; Stowers Institute for Medical Research, Kansas City, MO 64110., Xie Y; Department of Biochemistry and Molecular Biophysics, Washington University St. Louis School of Medicine, St. Louis, MO 63110., Garcia BA; Department of Biochemistry and Molecular Biophysics, Washington University St. Louis School of Medicine, St. Louis, MO 63110., Slaughter BD; Stowers Institute for Medical Research, Kansas City, MO 64110., Unruh JR; Stowers Institute for Medical Research, Kansas City, MO 64110., Viswanath S; National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India., Florens L; Stowers Institute for Medical Research, Kansas City, MO 64110., Workman JL; Stowers Institute for Medical Research, Kansas City, MO 64110., Washburn MP; Stowers Institute for Medical Research, Kansas City, MO 64110.

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2024 Aug 13; Vol. 121 (33), pp. e2318601121. Date of Electronic Publication: 2024 Aug 08.