Comparative evaluation of commercial DNA isolation approaches for nanopore-only bacterial genome assembly and plasmid recovery.

Autor: Kruasuwan, Worarat, Sawatwong, Pongpun, Jenjaroenpun, Piroon, Wankaew, Natnicha, Arigul, Tantip, Yongkiettrakul, Suganya, Lunha, Kamonwan, Sudjai, Aunthikarn, Siludjai, Duangkamon, Skaggs, Beth, Wongsurawat, Thidathip

Publikováno v: Scientific Reports; 11/12/2024, Vol. 14 Issue 1, p1-13, 13p

Exploiting nanopore sequencing for characterization and grading of IDH‐mutant gliomas.

Autor: Wongsurawat, Thidathip, Jenjaroenpun, Piroon, Anekwiang, Panatna, Arigul, Tantip, Thongrattana, Wichayapat, Jamshidi‐Parsian, Azemat, Boysen, Gunnar, Suriyaphol, Prapat, Suktitipat, Bhoom, Srirabheebhat, Prajak, Cheunsuchon, Pornsuk, Tanboon, Jantima, Nookaew, Intawat, Sathornsumetee, Sith

Publikováno v: Brain Pathology; Jan2024, Vol. 34 Issue 1, p1-13, 13p

GLIMMERS: glioma molecular markers exploration using long-read sequencing.

Autor: Thongrattana W; Master of Science Program in Medical Bioinformatics (International Program), Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand.; Division of Medical Bioinformatics, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand., Arigul T; Division of Medical Bioinformatics, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand.; Siriraj Long-read Lab (Si-LoL), Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand., Suktitipat B; Department of Biochemistry, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand.; Integrative Computational BioScience (ICBS) Center, Mahidol University, Nakon Pathom 73000, Thailand., Pithukpakorn M; Siriraj Genomics, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand.; Division of Medical Genetics, Department of Medicine, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand., Sathornsumetee S; Department of Medicine (Neurology), Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand., Wongsurawat T; Division of Medical Bioinformatics, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand.; Siriraj Long-read Lab (Si-LoL), Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand.; Department of Biomedical Informatics, College of Medicine, University of Arkansas for Medical Sciences, Little Rock, AR 72205, United States., Jenjaroenpun P; Division of Medical Bioinformatics, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand.; Siriraj Long-read Lab (Si-LoL), Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand.; Department of Biomedical Informatics, College of Medicine, University of Arkansas for Medical Sciences, Little Rock, AR 72205, United States.

Publikováno v: Bioinformatics advances [Bioinform Adv] 2024 Apr 15; Vol. 4 (1), pp. vbae058. Date of Electronic Publication: 2024 Apr 15 (Print Publication: 2024).

Complete Genome Sequences of Two Salmonella enterica Strains Isolated from Chicken Carcass Rinse Water in Thailand.

Autor: Ledlod S; Research Department, CPF Food Research and Development Center Co., Ltd., Lamsai, Phranakhon Si-Ayutthaya, Thailand., Thuamkaew P; Research Department, CPF Food Research and Development Center Co., Ltd., Lamsai, Phranakhon Si-Ayutthaya, Thailand., Luecha P; Bacteriology Department, Animal Health Diagnostic Center, Bangkok, Thailand., Arigul T; Division of Medical Bioinformatics, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.; Siriraj Long-read Lab, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand., Kruasuwan W; Division of Medical Bioinformatics, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.; Siriraj Long-read Lab, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand., Wankaew N; Division of Medical Bioinformatics, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.; Siriraj Long-read Lab, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand., Khongchatee A; Division of Medical Bioinformatics, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand., Jenjaroenpun P; Division of Medical Bioinformatics, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.; Siriraj Long-read Lab, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand., Wongsurawat T; Division of Medical Bioinformatics, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.; Siriraj Long-read Lab, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand.

Publikováno v: Microbiology resource announcements [Microbiol Resour Announc] 2023 Jan 24; Vol. 12 (1), pp. e0123522. Date of Electronic Publication: 2023 Jan 04.