Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Ariane Belka"'
Publikováno v:
Virus Research
Unbiased sequencing is an upcoming method to gain information of the microbiome in a sample and for the detection of unrecognized pathogens. There are many software tools for a taxonomic classification of such metagenomics datasets available. Numerou
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7d8adc5aa09619c5f00b300c8063771b
https://doi.org/10.1016/j.virusres.2018.10.002
https://doi.org/10.1016/j.virusres.2018.10.002
Autor:
Dennis Schmitz, Marion Koopmans, Thomas Nordahl Petersen, Ward Deboutte, Annika Brinkmann, Vítor Borges, Erhard van der Vries, Florian Hansmann, Frank Møller Aarestrup, Claudia Wylezich, Rene S. Hendriksen, Dirk Höper, Pierrick Lucas, Alessio Lorusso, Christian Drosten, Iolanda Mangone, Annelies Kroneman, Martin Beer, Maurilia Marcacci, Angeliki Melidou, Andreas Nitsche, Terry Jones, Yannick Blanchard, Albert D. M. E. Osterhaus, Ariane Belka, Bas B. Oude Munnink, Richard J. Ellis, Anna Papa, Wolfgang Baumgärtner, Jelle Matthijnssens, Anne Pohlmann, Victor M. Corman, Andreas Andrusch, Miguel Pinto, Cesare Cammà, Alexandra Nunes
Publikováno v:
Journal of Clinical Microbiology, 57(8):UNSP e00466-19. American Society for Microbiology
Brinkmann, A, Andrusch, A, Belka, A, Wylezich, C, Höper, D, Pohlmann, A, Petersen, T N, Lucas, P, Blanchard, Y, Papa, A, Melidou, A, Oude Munnink, B B, Matthijnssens, J, Deboutte, W, Ellis, R J, Hansmann, F, Baumgärtner, W, van der Vries, E, Osterhaus, A, Camma, C, Mangone, I, Lorusso, A, Maracci, M, Nunes, A, Pinto, M, Borges, V, Kroneman, A, Schmitz, D, Corman, V M, Drosten, C, Jones, T C, Hendriksen, R S, Aarestrup, F M, Koopmans, M, Beer, M & Nitsche, A 2019, ' Proficiency testing of virus diagnostics based on bioinformatics analysis of simulated in silico high-throughput sequencing datasets ', Journal of Clinical Microbiology, vol. 57, no. 8, e00466-19 . https://doi.org/10.1128/JCM.00466-19
Journal of Clinical Microbiology
Brinkmann, A, Andrusch, A, Belka, A, Wylezich, C, Höper, D, Pohlmann, A, Petersen, T N, Lucas, P, Blanchard, Y, Papa, A, Melidou, A, Oude Munnink, B B, Matthijnssens, J, Deboutte, W, Ellis, R J, Hansmann, F, Baumgärtner, W, van der Vries, E, Osterhaus, A, Camma, C, Mangone, I, Lorusso, A, Maracci, M, Nunes, A, Pinto, M, Borges, V, Kroneman, A, Schmitz, D, Corman, V M, Drosten, C, Jones, T C, Hendriksen, R S, Aarestrup, F M, Koopmans, M, Beer, M & Nitsche, A 2019, ' Proficiency testing of virus diagnostics based on bioinformatics analysis of simulated in silico high-throughput sequencing datasets ', Journal of Clinical Microbiology, vol. 57, no. 8, e00466-19 . https://doi.org/10.1128/JCM.00466-19
Journal of Clinical Microbiology
Quality management and independent assessment of high-throughput sequencing-based virus diagnostics have not yet been established as a mandatory approach for ensuring comparable results. The sensitivity and specificity of viral high-throughput sequen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::68e7a40714263bd82773fc531849c304
https://hdl.handle.net/10400.18/6623
https://hdl.handle.net/10400.18/6623
Publikováno v:
International Journal for Parasitology
Efficient and reliable identification of emerging pathogens is crucial for the design and implementation of timely and proportionate control strategies. This is difficult if the pathogen is so far unknown or only distantly related with known pathogen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::09b3d3a8b8b1ff9f639279ea4a75ef30
https://pubmed.ncbi.nlm.nih.gov/31361998
https://pubmed.ncbi.nlm.nih.gov/31361998
Autor:
Nicole Silvester, Frank Møller Aarestrup, Sam Holt, Martin Christen Frølund Thomsen, Nadim Rahman, Nima Pakseresht, Marion Koopmans, Dávid Visontai, Peter W. Harrison, José Cisneros, Suran Jayathilaka, Clara Amid, Lukasz D. Dynovski, Jeffrey Edward Skiby, Rolf Sommer Kaas, Abdulrahman Hussein, Dirk Höper, Carolina dos S. Ribeiro, George B. Haringhuizen, Ole Lund, Guy Cochrane, Matthew Cotten, Camilla Hundahl, Rasko Leinonen, Blaise T. F. Alako, Surbhi Malhotra-Kumar, Ariane Belka, János M. Szalai-Gindl, István Csabai, David F. Nieuwenhuijse, Basil Britto Xavier, József Stéger, Bálint Ármin Pataki
Data sharing enables research communities to exchange findings and build upon the knowledge that arises from their discoveries. Areas of public and animal health as well as food safety would benefit from rapid data sharing when it comes to emergencie
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0284667553b4b708097e30dec902769c
Autor:
Martin Christen Frølund Thomsen, Matthew Cotten, Peter W. Harrison, David F. Nieuwenhuijse, Simone M. Cacciò, Ariane Belka, Clara Amid, Surbhi Malhotra-Kumar, Annelies Kroneman, Frank Møller Aarestrup, Sam Holt, Rasko Leinonen, István Csabai, Xin Liu, Lukasz D. Dynovski, Basil Britto Xavier, Nadim Rahman, José Cisneros, József Stéger, Nicole Silvester, Ole Lund, Abdulrahman Hussein, János M. Szalai-Gindl, Camilla Hundahl, Carolina dos S. Ribeiro, Rolf Sommer Kaas, George B. Haringhuizen, Blaise T. F. Alako, Nima Pakseresht, Jeffrey Edward Skiby, Dirk Höper, Guy Cochrane, Dennis Schmitz, Bálint Ármin Pataki, Marion Koopmans, Dávid Visontai, Suran Jayathilaka
Publikováno v:
Database
Database : the journal of biological databases and curation, 2019. Oxford University Press
Amid, C, Pakseresht, N, Silvester, N, Jayathilaka, S, Lund, O, Dynovski, L D, Pataki, B, Visontai, D, Xavier, B B, Alako, B T F, Belka, A, Cisneros, J L B, Cotten, M, Haringhuizen, G B, Harrison, P W, Höper, D, Holt, S, Hundahl, C, Hussein, A, Kaas, R S, Liu, X, Leinonen, R, Malhotra-Kumar, S, Nieuwenhuijse, D F, Rahman, N, Dos S Ribeiro, C, Skiby, J E, Schmitz, D, Stéger, J, Szalai-Gindl, J M, Thomsen, M C F, Cacciò, S M, Csabai, I, Kroneman, A, Koopmans, M, Aarestrup, F M & Cochrane, G 2019, ' The COMPARE Data Hubs ', Database : the journal of biological databases and curation, vol. 2019, baz136, pp. 1-14 . https://doi.org/10.1093/database/baz136
Database: The Journal of Biological Databases and Curation
Database : the journal of biological databases and curation, 2019. Oxford University Press
Amid, C, Pakseresht, N, Silvester, N, Jayathilaka, S, Lund, O, Dynovski, L D, Pataki, B, Visontai, D, Xavier, B B, Alako, B T F, Belka, A, Cisneros, J L B, Cotten, M, Haringhuizen, G B, Harrison, P W, Höper, D, Holt, S, Hundahl, C, Hussein, A, Kaas, R S, Liu, X, Leinonen, R, Malhotra-Kumar, S, Nieuwenhuijse, D F, Rahman, N, Dos S Ribeiro, C, Skiby, J E, Schmitz, D, Stéger, J, Szalai-Gindl, J M, Thomsen, M C F, Cacciò, S M, Csabai, I, Kroneman, A, Koopmans, M, Aarestrup, F M & Cochrane, G 2019, ' The COMPARE Data Hubs ', Database : the journal of biological databases and curation, vol. 2019, baz136, pp. 1-14 . https://doi.org/10.1093/database/baz136
Database: The Journal of Biological Databases and Curation
Data sharing enables research communities to exchange findings and build upon the knowledge that arises from their discoveries. Areas of public and animal health as well as food safety would benefit from rapid data sharing when it comes to emergencie
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::04cd3b2d90538fc8fc94c1f8bd9609ca
Autor:
Lutz Geue, Christian Berens, Christian Menge, Lothar H. Wieler, Torsten Semmler, Inga Eichhorn, Stefanie A. Barth, Ariane Belka, Derek Pickard
Publikováno v:
Applied and environmental microbiology. 82(17)
Shiga toxin-producing Escherichia coli (STEC) strains can colonize cattle for several months and may, thus, serve as gene reservoirs for the genesis of highly virulent zoonotic enterohemorrhagic E. coli (EHEC). Attempts to reduce the human risk for a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::456fd2b3dbb48c3a9fa9b8d60f18792c
https://pubmed.ncbi.nlm.nih.gov/27371579
https://pubmed.ncbi.nlm.nih.gov/27371579
Autor:
Amid, Clara1 (AUTHOR) amid@ebi.ac.uk, Pakseresht, Nima1 (AUTHOR), Silvester, Nicole1 (AUTHOR), Jayathilaka, Suran1 (AUTHOR), Lund, Ole2 (AUTHOR), Dynovski, Lukasz D2 (AUTHOR), Pataki, Bálint Á3,4 (AUTHOR), Visontai, Dávid3,4 (AUTHOR), Xavier, Basil Britto5 (AUTHOR), Alako, Blaise T F1 (AUTHOR), Belka, Ariane6 (AUTHOR), Cisneros, Jose L B2 (AUTHOR), Cotten, Matthew7 (AUTHOR), Haringhuizen, George B8 (AUTHOR), Harrison, Peter W1 (AUTHOR), Höper, Dirk6 (AUTHOR), Holt, Sam1 (AUTHOR), Hundahl, Camilla2 (AUTHOR), Hussein, Abdulrahman1 (AUTHOR), Kaas, Rolf S2 (AUTHOR)
Publikováno v:
Database: The Journal of Biological Databases & Curation. 2019, Vol. 2019, pN.PAG-N.PAG. 1p.