Zobrazeno 1 - 10
of 79
pro vyhledávání: '"Antton Alberdi"'
Publikováno v:
Evolutionary Applications, Vol 17, Iss 10, Pp n/a-n/a (2024)
ABSTRACT Microorganisms associated with animals harbour a unique set of functional traits pivotal for the normal functioning of their hosts. This realisation has led researchers to hypothesise that animal‐associated microbial communities may boost
Externí odkaz:
https://doaj.org/article/59ddf1c345884b4d813fde3120b84a93
Publikováno v:
Cell Reports: Methods, Vol 4, Iss 7, Pp 100820- (2024)
Summary: Holo-omics refers to the joint study of non-targeted molecular data layers from host-microbiota systems or holobionts, which is increasingly employed to disentangle the complex interactions between the elements that compose them. We navigate
Externí odkaz:
https://doaj.org/article/b06d1e663033498f8ec70368e60683b3
Autor:
Raphael Eisenhofer, Joseph Nesme, Luisa Santos-Bay, Adam Koziol, Søren Johannes Sørensen, Antton Alberdi, Ostaizka Aizpurua
Publikováno v:
Microbiology Spectrum, Vol 12, Iss 4 (2024)
ABSTRACTShotgun metagenomics enables the reconstruction of complex microbial communities at a high level of detail. Such an approach can be conducted using both short-read and long-read sequencing data, as well as a combination of both. To assess the
Externí odkaz:
https://doaj.org/article/a192a407ef314dcf9ac29a4497e2213b
Autor:
Edward S. Rice, Antton Alberdi, James Alfieri, Giridhar Athrey, Jennifer R. Balacco, Philippe Bardou, Heath Blackmon, Mathieu Charles, Hans H. Cheng, Olivier Fedrigo, Steven R. Fiddaman, Giulio Formenti, Laurent A. F. Frantz, M. Thomas P. Gilbert, Cari J. Hearn, Erich D. Jarvis, Christophe Klopp, Sofia Marcos, Andrew S. Mason, Deborah Velez-Irizarry, Luohao Xu, Wesley C. Warren
Publikováno v:
BMC Biology, Vol 21, Iss 1, Pp 1-17 (2023)
Abstract Background The red junglefowl, the wild outgroup of domestic chickens, has historically served as a reference for genomic studies of domestic chickens. These studies have provided insight into the etiology of traits of commercial importance.
Externí odkaz:
https://doaj.org/article/ec4f115e8cb94416b00a87c078953189
Autor:
Jérémy S. P. Froidevaux, Nia Toshkova, Luc Barbaro, Ana Benítez-López, Christian Kerbiriou, Isabelle Le Viol, Michela Pacifici, Luca Santini, Clare Stawski, Danilo Russo, Jasja Dekker, Antton Alberdi, Francisco Amorim, Leonardo Ancillotto, Kévin Barré, Yves Bas, Lisette Cantú-Salazar, Dina K. N. Dechmann, Tiphaine Devaux, Katrine Eldegard, Sasan Fereidouni, Joanna Furmankiewicz, Daniela Hamidovic, Davina L. Hill, Carlos Ibáñez, Jean-François Julien, Javier Juste, Peter Kaňuch, Carmi Korine, Alexis Laforge, Gaëlle Legras, Camille Leroux, Grzegorz Lesiński, Léa Mariton, Julie Marmet, Vanessa A. Mata, Clare M. Mifsud, Victoria Nistreanu, Roberto Novella-Fernandez, Hugo Rebelo, Niamh Roche, Charlotte Roemer, Ireneusz Ruczyński, Rune Sørås, Marcel Uhrin, Adriana Vella, Christian C. Voigt, Orly Razgour
Publikováno v:
Scientific Data, Vol 10, Iss 1, Pp 1-13 (2023)
Abstract Knowledge of species’ functional traits is essential for understanding biodiversity patterns, predicting the impacts of global environmental changes, and assessing the efficiency of conservation measures. Bats are major components of mamma
Externí odkaz:
https://doaj.org/article/9630124bf02046dca494c2cfba1c9b21
Autor:
Adam Koziol, Iñaki Odriozola, Aoife Leonard, Raphael Eisenhofer, Carlos San José, Ostaizka Aizpurua, Antton Alberdi
Publikováno v:
mBio, Vol 14, Iss 5 (2023)
ABSTRACT The ability of the gut microbiome has been posited as an additional axis of animals’ phenotypic plasticity. However, whether and how such plasticity varies across hosts with different biological features remains unclear. We performed a cap
Externí odkaz:
https://doaj.org/article/f500fc7338924b9e840e3bb7e8c7f1e7
Publikováno v:
ISME Communications, Vol 3, Iss 1, Pp 1-5 (2023)
Abstract Inferring the functional capabilities of bacteria from metagenome-assembled genomes (MAGs) is becoming a central process in microbiology. Here we show that the completeness of genomes has a significant impact on the recovered functional sign
Externí odkaz:
https://doaj.org/article/99dc534d31e741c4a3dadd4753e18910
Autor:
Mattia Pirolo, Carmen Espinosa-Gongora, Antton Alberdi, Raphael Eisenhofer, Matteo Soverini, Esben Østergaard Eriksen, Ken Steen Pedersen, Luca Guardabassi
Publikováno v:
Animal Microbiome, Vol 5, Iss 1, Pp 1-13 (2023)
Abstract Background Understanding the complex structures and interactions of the bacterial communities inhabiting the upper (URT) and lower (LRT) respiratory tract of pigs is at an early stage. The objective of this study was to characterize the bact
Externí odkaz:
https://doaj.org/article/18813402edf94508b55b244c18f37f49
Autor:
Amanda Bolt Botnen, Mads Bjørn Bjørnsen, Antton Alberdi, M.Thomas P. Gilbert, Ostaizka Aizpurua
Publikováno v:
Heliyon, Vol 9, Iss 1, Pp e12861- (2023)
As metagenomic studies continue to increase in size and complexity, they are often required to incorporate data from geographically isolated locations or longitudinal time samples. This represents a technical challenge, given that many of the commonl
Externí odkaz:
https://doaj.org/article/121af7c3931744368db8826663eaff03
Publikováno v:
Scientific Reports, Vol 11, Iss 1, Pp 1-10 (2021)
Abstract The gut microbiota is recognised as an essential asset for the normal functioning of animal biology. When wild animals are moved into captivity, the modified environmental pressures are expected to rewire the gut microbiota, yet whether this
Externí odkaz:
https://doaj.org/article/dab0758c67d0403b87bf3cfce4ee6630