Zobrazeno 1 - 10
of 44
pro vyhledávání: '"Antti Karkman"'
Publikováno v:
BMC Genomics, Vol 25, Iss 1, Pp 1-17 (2024)
Abstract Background Assembly of metagenomic samples can provide essential information about the mobility potential and taxonomic origin of antibiotic resistance genes (ARGs) and inform interventions to prevent further spread of resistant bacteria. Ho
Externí odkaz:
https://doaj.org/article/e2cc9ac547cb41568b3e9afec77e9cf3
Autor:
Melina A. Markkanen, Kaisa Haukka, Katariina M. M. Pärnänen, Victorien Tamegnon Dougnon, Isidore Juste O. Bonkoungou, Zakaria Garba, Halidou Tinto, Anniina Sarekoski, Antti Karkman, Anu Kantele, Marko P. J. Virta
Publikováno v:
mSphere, Vol 8, Iss 1 (2023)
ABSTRACT Antibiotic resistance is a global threat to human health, with the most severe effect in low- and middle-income countries. We explored the presence of antibiotic resistance genes (ARGs) in the hospital wastewater (HWW) of nine hospitals in B
Externí odkaz:
https://doaj.org/article/a68787eba18440f787eac23d0e141493
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-8 (2019)
Increased abundance of antibiotic resistance genes in the environment may be due to selection pressure by residual antibiotics, or to contamination with resistant bacteria from human faeces. Here, Karkman et al. analyze metagenomic data and find evid
Externí odkaz:
https://doaj.org/article/4d172ac787a945728371f3e18f6e1e84
Autor:
Carolin Rutgersson, Stefan Ebmeyer, Simon Bo Lassen, Antti Karkman, Jerker Fick, Erik Kristiansson, Kristian K. Brandt, Carl-Fredrik Flach, D.G. Joakim Larsson
Publikováno v:
Environment International, Vol 137, Iss , Pp - (2020)
The widespread practice of applying sewage sludge to arable land makes use of nutrients indispensable for crops and reduces the need for inorganic fertilizer, however this application also provides a potential route for human exposure to chemical con
Externí odkaz:
https://doaj.org/article/7e03ed7e11574c9b8c674367c928702f
Autor:
Katariina Pärnänen, Antti Karkman, Jenni Hultman, Christina Lyra, Johan Bengtsson-Palme, D. G. Joakim Larsson, Samuli Rautava, Erika Isolauri, Seppo Salminen, Himanshu Kumar, Reetta Satokari, Marko Virta
Publikováno v:
Nature Communications, Vol 9, Iss 1, Pp 1-11 (2018)
The infant gut microbiota has a high abundance of antibiotic resistance genes (ARGs) even in the absence of antibiotic exposure. Here, Pärnänen et al. analyse breast milk as well as infant and maternal gut microbiomes, and show that some of the inf
Externí odkaz:
https://doaj.org/article/46dc8bf8babf4feab2f34a35fb395371
Autor:
Windi Indra Muziasari, Satoshi Managaki, Katariina Pärnänen, Antti Karkman, Christina Lyra, Manu Tamminen, Satoru Suzuki, Marko Virta
Publikováno v:
PLoS ONE, Vol 9, Iss 3, p e92702 (2014)
Persistence and dispersal of antibiotic resistance genes (ARGs) are important factors for assessing ARG risk in aquaculture environments. Here, we quantitatively detected ARGs for sulphonamides (sul1 and sul2) and trimethoprim (dfrA1) and an integras
Externí odkaz:
https://doaj.org/article/86ccc3336bb84d719d874ee3499415da
Autor:
Mailis Laht, Antti Karkman, Veiko Voolaid, Christian Ritz, Tanel Tenson, Marko Virta, Veljo Kisand
Publikováno v:
PLoS ONE, Vol 9, Iss 8, p e103705 (2014)
Antibiotics and antibiotic resistant bacteria enter wastewater treatment plants (WWTPs), an environment where resistance genes can potentially spread and exchange between microbes. Several antibiotic resistance genes (ARGs) were quantified using qPCR
Externí odkaz:
https://doaj.org/article/facab279daa3455ca06fa827ea4f4d89
Autor:
Katariina Pärnänen, Melina A. Markkanen, Kaisa Haukka, Anu Kantele, Marko Virta, Halidou Tinto, Anniina Sarekoski, Antti Karkman, Victorien Dougnon, Isidore Juste O. Bonkoungou, Zakaria Garba
Antibiotic resistance is one of the greatest global threats to human health, but substantial gaps in antibiotic resistance data exist in West African countries. We explored the presence of antibiotic resistance genes (ARGs) in the hospital wastewater
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0bfca714b02b3b7a1cdc7df102dd77af
https://doi.org/10.1101/2021.10.19.21265183
https://doi.org/10.1101/2021.10.19.21265183
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-8 (2019)
Nature Communications
Nature Communications
Discharge of treated sewage leads to release of antibiotic resistant bacteria, resistance genes and antibiotic residues to the environment. However, it is unclear whether increased abundance of antibiotic resistance genes in sewage and sewage-impacte
Autor:
Samuel E. Miller, Iva Veseli, Emily Fogarty, Andrea R. Watson, Isaac Fink, Matthew S. Schechter, Antonio Fernandez-Guerra, Mahmoud Yousef, Michael D. Lee, John M. Eppley, Evan Kiefl, Veronika Kivenson, Luke J. McKay, Jarrod J. Scott, A. Murat Eren, Jessika Fuessel, Lois Maignien, Alon Shaiber, Elaina D. Graham, Ryan M Moore, Amy D. Willis, Andreas Sjödin, Sarah L. R. Stevens, Quentin Clayssen, Bryan D. Merrill, Daniel Blankenberg, Elizabeth A. McDaniel, Rika E. Anderson, Jessica N. Pan, Antti Karkman, Özcan C. Esen, Florian Trigodet, Xabier Vázquez-Campos, Tom O. Delmont
Publikováno v:
Nat Microbiol
Nature Microbiology (2058-5276) (Springer Science and Business Media LLC), 2021-01, Vol. 6, N. 1, P. 3-6
Nature Microbiology (2058-5276) (Springer Science and Business Media LLC), 2021-01, Vol. 6, N. 1, P. 3-6
Big data abound in microbiology, but the workflows designed to enable researchers to interpret data can constrain the biological questions that can be asked. Five years after anvi'o was first published, this community-led multi-omics platform is matu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8195345b6912543c672f426dc89368cf
http://hdl.handle.net/10138/332078
http://hdl.handle.net/10138/332078