Zobrazeno 1 - 5
of 5
pro vyhledávání: '"Anton Khodak"'
Autor:
Kenzo-Hugo Hillion, Ivan Kuzmin, Anton Khodak, Eric Rasche, Michael Crusoe, Hedi Peterson, Jon Ison, Hervé Ménager
Publikováno v:
F1000Research, Vol 6 (2017)
Workbench and workflow systems such as Galaxy, Taverna, Chipster, or Common Workflow Language (CWL)-based frameworks, facilitate the access to bioinformatics tools in a user-friendly, scalable and reproducible way. Still, the integration of tools in
Externí odkaz:
https://doaj.org/article/8920f2ec64124dd89edb749617f54e9d
Autor:
Felicity Allen, Francesco Iorio, Fiona M. Behan, Kosuke Yusa, Mathew J. Garnett, Leopold Parts, Anton Khodak
Publikováno v:
Genome Research. 29:464-471
Genome-wide CRISPR/Cas9 knockout screens are revolutionizing mammalian functional genomics. However, their range of applications remains limited by signal variability from different guide RNAs that target the same gene, which confounds gene effect es
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::45e80f874a7351238360a8d338f44c83
https://doi.org/10.1101/gr.238923.118
https://doi.org/10.1101/gr.238923.118
Autor:
Yaron Galanty, Vitalii Kleshchevnikov, Andrew R. Bassett, Alexander Strong, Luca Crepaldi, Anton Khodak, Heather P. Harding, Pietro De Angeli, Clara Alsinet, Vladimir Yu. Kiselev, Felicity Allen, Stephen P. Jackson, Francisco Muñoz-Martínez, Petra Páleníková, Michael Kosicki, Leopold Parts, Emmanouil Metzakopian
Publikováno v:
Nature Biotechnology. 37:64-72
The DNA mutation produced by cellular repair of a CRISPR-Cas9-generated double-strand break determines its phenotypic effect. It is known that the mutational outcomes are not random, but depend on DNA sequence at the targeted location. Here we system
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bfc0636aa599a94340c6b65f1cb953b3
https://doi.org/10.1038/nbt.4317
https://doi.org/10.1038/nbt.4317
Autor:
Anton Khodak, Tibor Simko, Dinos Kousidis, Kyle Cranmer, Lukas Heinrich, Diego Rodríguez, Michael R. Crusoe
Publikováno v:
eScience
We describe the REANA reusable and reproducible research data analysis platform that originated in the domain of particle physics. We integrated support for running Common Workflow Language (CWL) workflows that originated in the domain of life scienc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d508d17f42ff127d43689fc0a0af2c47
http://cds.cern.ch/record/2652800
http://cds.cern.ch/record/2652800
Autor:
Jon Ison, Eric Rasche, Anton Khodak, Hervé Ménager, Kenzo-Hugo Hillion, Hedi Peterson, Ivan Kuzmin, Michael R. Crusoe
Publikováno v:
Hillion, K-H, Kuzmin, I, Khodak, A, Rasche, E, Crusoe, M, Peterson, H, Ison, J & Ménager, H 2017, ' Using bio.tools to generate and annotate workbench tool descriptions ', F1000Research, vol. 6, 2074 . https://doi.org/10.12688/f1000research.12974.1
F1000Research
F1000Research
Workbench and workflow systems such as Galaxy, Taverna, Chipster, or Common Workflow Language (CWL)-based frameworks, facilitate the access to bioinformatics tools in a user-friendly, scalable and reproducible way. Still, the integration of tools in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::14ae34f1b54489f1d3d4f3a43dd3c8ba
https://doi.org/10.12688/f1000research.12974.1
https://doi.org/10.12688/f1000research.12974.1