Zobrazeno 1 - 10
of 36
pro vyhledávání: '"Anthony L. Shiver"'
Autor:
Carlos Geert Pieter Voogdt, Surya Tripathi, Stefan Oliver Bassler, Saria A. McKeithen-Mead, Emma R. Guiberson, Alexandra Koumoutsi, Afonso Martins Bravo, Cullen Buie, Michael Zimmermann, Justin L. Sonnenburg, Athanasios Typas, Adam M. Deutschbauer, Anthony L. Shiver, Kerwyn Casey Huang
Publikováno v:
Cell Reports, Vol 43, Iss 1, Pp 113519- (2024)
Summary: The critical role of the intestinal microbiota in human health and disease is well recognized. Nevertheless, there are still large gaps in our understanding of the functions and mechanisms encoded in the genomes of most members of the gut mi
Externí odkaz:
https://doaj.org/article/f55492c84db847c78fb9dfafefb55708
Autor:
Surya Tripathi, Carlos Geert Pieter Voogdt, Stefan Oliver Bassler, Mary Anderson, Po-Hsun Huang, Nazgul Sakenova, Tümay Capraz, Sunit Jain, Alexandra Koumoutsi, Afonso Martins Bravo, Valentine Trotter, Michael Zimmerman, Justin L. Sonnenburg, Cullen Buie, Athanasios Typas, Adam M. Deutschbauer, Anthony L. Shiver, Kerwyn Casey Huang
Publikováno v:
Cell Reports, Vol 43, Iss 1, Pp 113517- (2024)
Summary: Randomly barcoded transposon mutant libraries are powerful tools for studying gene function and organization, assessing gene essentiality and pathways, discovering potential therapeutic targets, and understanding the physiology of gut bacter
Externí odkaz:
https://doaj.org/article/023823f8c8824e889806312e660b82aa
Autor:
Heidi A. Arjes, Jiawei Sun, Hualan Liu, Taylor H. Nguyen, Rebecca N. Culver, Arianna I. Celis, Sophie Jean Walton, Kimberly S. Vasquez, Feiqiao Brian Yu, Katherine S. Xue, Daniel Newton, Ricardo Zermeno, Meredith Weglarz, Adam Deutschbauer, Kerwyn Casey Huang, Anthony L. Shiver
Publikováno v:
BMC Biology, Vol 20, Iss 1, Pp 1-17 (2022)
Abstract Background Ordered transposon-insertion collections, in which specific transposon-insertion mutants are stored as monocultures in a genome-scale collection, represent a promising tool for genetic dissection of human gut microbiota members. H
Externí odkaz:
https://doaj.org/article/22ce794b6e254b8ebb0ddbb93ac44327
Autor:
Anthony L Shiver, Hendrik Osadnik, George Kritikos, Bo Li, Nevan Krogan, Athanasios Typas, Carol A Gross
Publikováno v:
PLoS Genetics, Vol 13, Iss 7, p e1006902 (2017)
[This corrects the article DOI: 10.1371/journal.pgen.1006124.].
Externí odkaz:
https://doaj.org/article/891df7df3c68438897b9d9817b4d28a0
Autor:
Anthony L Shiver, Hendrik Osadnik, George Kritikos, Bo Li, Nevan Krogan, Athanasios Typas, Carol A Gross
Publikováno v:
PLoS Genetics, Vol 12, Iss 6, p e1006124 (2016)
Fighting antibiotic resistance requires a deeper understanding of the genetic factors that determine the antibiotic susceptibility of bacteria. Here we describe a chemical-genomic screen in Escherichia coli K-12 that was designed to discover new aspe
Externí odkaz:
https://doaj.org/article/9969ea02cb364226a0cce984a9238914
Autor:
Po-Hsun Huang, Sijie Chen, Anthony L. Shiver, Rebecca Neal Culver, Kerwyn Casey Huang, Cullen R. Buie
Conventional cuvette-based and microfluidics-based bacterial electroporation approaches have distinct advantages, but they are typically limited to relatively small sample volumes, reducing their utility for applications requiring high throughput suc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::aae3620e4314b41d5f8daeda7b81a7df
https://doi.org/10.1101/2022.01.14.476275
https://doi.org/10.1101/2022.01.14.476275
Autor:
Po-Hsun Huang, Sijie Chen, Anthony L. Shiver, Rebecca Neal Culver, Kerwyn Casey Huang, Cullen R. Buie
Publikováno v:
PLOS Biology. 20:e3001727
Conventional cuvette-based and microfluidics-based electroporation approaches for bacterial gene delivery have distinct advantages, but they are typically limited to relatively small sample volumes, reducing their utility for applications requiring h
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8d8e74dc092b84e7b6e7c04581adb295
https://doi.org/10.1371/journal.pbio.3001727
https://doi.org/10.1371/journal.pbio.3001727
Autor:
Alice G. Cheng, Po-Yi Ho, Andrés Aranda-Díaz, Sunit Jain, Feiqiao B. Yu, Xiandong Meng, Min Wang, Mikhail Iakiviak, Kazuki Nagashima, Aishan Zhao, Pallavi Murugkar, Advait Patil, Katayoon Atabakhsh, Allison Weakley, Jia Yan, Ariel R. Brumbaugh, Steven Higginbottom, Alejandra Dimas, Anthony L. Shiver, Adam Deutschbauer, Norma Neff, Justin L. Sonnenburg, Kerwyn Casey Huang, Michael A. Fischbach
Publikováno v:
Cell. 185:3617-3636.e19
Efforts to model the human gut microbiome in mice have led to important insights into the mechanisms of host-microbe interactions. However, the model communities studied to date have been defined or complex, but not both, limiting their utility. Here
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e1ea33431d88a23f22a5f493d6ccf88a
https://doi.org/10.1016/j.cell.2022.08.003
https://doi.org/10.1016/j.cell.2022.08.003
Autor:
Michael A. Fischbach, Andrés Aranda-Díaz, Feiqiao Brian Yu, Weakley A, Iakiviak M, Norma F. Neff, Sunit Jain, Adam M. Deutschbauer, Alan G. Cheng, Patil A, Meng X, Anthony L. Shiver, Kerwyn Casey Huang
Efforts to model the gut microbiome have yielded important insights into the mechanisms of interspecies interactions, the impact of priority effects on ecosystem dynamics, and the role of diet and nutrient availability in determining community compos
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5fa225c7018b719538cb0d84ce1c3b43
https://doi.org/10.1101/2021.06.15.448618
https://doi.org/10.1101/2021.06.15.448618
Autor:
Richard Alexander, Brian D. Strahl, Shuangying Jiang, John H. Morris, Kaitlin K. Chaung, Raghuvar Dronamraju, Shuyi Wang, James S. Fraser, Derek Bogdanoff, Stefan Bohn, James E. Haber, Peter Cimermancic, Michael Shales, Nevan J. Krogan, Anthony L. Shiver, Riccardo Pellarin, Jef D. Boeke, Hannes Braberg, David Mavor, Junbiao Dai, Jiewei Xu, Andrej Sali, Ignacia Echeverria, Joel S. Bader, Ruth Hüttenhain, Gajendradhar Dwivedi, Carol A. Gross, Dina Schneidman
Publikováno v:
Science (New York, N.Y.), vol 370, iss 6522
Science
Science
From phenotype to structure Much insight has come from structures of macromolecular complexes determined by methods such as crystallography or cryo–electron microscopy. However, looking at transient complexes remains challenging, as does determinin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::99d0f10bdfb513e43da5009d574b06bf
https://escholarship.org/uc/item/43n670zm
https://escholarship.org/uc/item/43n670zm