Zobrazeno 1 - 10
of 34
pro vyhledávání: '"Anne-Lise Veuthey"'
Summary: We present a new database, GPSDB (Gene and Protein Synonyms DataBase) which collects gene/protein names, in a species specific way, from 14 main biological resources. A web-based search interface gives access to the database: given a gene/pr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6629d5e3b4aa9ffef3d8b696669e7aa2
http://doc.rero.ch/record/297850/files/bti235.pdf
http://doc.rero.ch/record/297850/files/bti235.pdf
Publikováno v:
Bioinformatics
Bioinformatics; Vol 26
Bioinformatics; Vol 26
Summary: The SwissVar portal provides access to a comprehensive collection of single amino acid polymorphisms and diseases in the UniProtKB/Swiss-Prot database via a unique search engine. In particular, it gives direct access to the newly improved Sw
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b6c55232e67682d62db9668182168924
http://doc.rero.ch/record/299717/files/btq028.pdf
http://doc.rero.ch/record/299717/files/btq028.pdf
Publikováno v:
Journal of Neurochemistry. 62:1939-1946
Subcellular localization of hexokinase in the honeybee drone retina was examined following fractionation of cell homogenate using differential centrifugation. Nearly all hexokinase activity was found in the cytosolic fraction, following a similar dis
Publikováno v:
Journal of Integrative Bioinformatics, Vol 4, Iss 3, Pp 243-251 (2007)
In order to improve the accessibility of genomic and proteomic information to medical researchers, we have developed a procedure to link biological information on proteins involved in diseases to the MeSH and ICD-10 disease terminologies. For this pu
Autor:
Violaine Pillet, Célia Boyer, Julien Gobeill, Imad Tbahriti, Antoine Geissbuhler, Christine Chichester, Anne-Lise Veuthey, Paul Fabry, Christian Lovis, Patrick Ruch, Dietrich Rebholz-Schuhmann
Publikováno v:
International Journal of Medical Informatics. 76:195-200
PROBLEM: key word assignment has been largely used in MEDLINE to provide an indicative “gist” of the content of articles and to help retrieving biomedical articles. Abstracts are also used for this purpose. However with usually more than 300 word
Publikováno v:
PROTEOMICS. 4:1626-1632
N-terminal myristoylation is a post-translational modification that causes the addition of a myristate to a glycine in the N-terminal end of the amino acid chain. This work presents neural network (NN) models that learn to discriminate myristoylated
Publikováno v:
ISMB (Supplement of Bioinformatics)
Motivation: Searching relevant publications for manual database annotation is a tedious task. In this paper, we apply a combination of Natural Language Processing (NLP) and probabilistic classification to re-rank documents returned by PubMed accordin
Autor:
Ursula Hinz, Prudence Mutowo, Laure Verbregue, Weizhong Li, Nadine Gruaz-Gumowski, Chantal Hulo, Hermann Zellner, Shyamala Sundaram, P Lemercier, Guoying Qi, Parit Bansal, Tony Sawford, Sebastien Gehant, Delphine Baratin, Francesco Fazzini, Monica Pozzato, Séverine Duvaud, Lai-Su L. Yeh, Nicole Redaschi, Emma Hatton-Ellis, Darren A. Natale, Damien Lieberherr, Luis Figueira, Bernd Roechert, Borisas Bursteinas, Gayatri Chavali, Brigitte Boeckmann, Cristina Casal-Casas, Baris E. Suzek, Cathy H. Wu, Paul Gane, Ghislaine Argoud-Puy, Klemens Pichler, Rachael P. Huntley, Sangya Pundir, Alan Bridge, Edouard de Castro, Benoit Bely, Kristian B. Axelsen, Emmanuel Boutet, Andre Stutz, Penelope Garmiri, Christian J. A. Sigrist, John S. Garavelli, Rolf Apweiler, Peter B. McGarvey, Patrick Masson, Maria Jesus Martin, K Sonesson, Xavier Watkins, Ioannis Xenarios, Vladimir Volynkin, Hamish McWilliam, Mark Bingley, Guillaume Keller, Hongzhan Huang, Rabie Saidi, Sylvain Poux, Tunca Doğan, Yuqi Wang, Diego Poggioli, Rodrigo Lopez, Alistair MacDougall, Kati Laiho, Qinghua Wang, W Liu, Carlos Bonilla, Duncan Legge, C. R. Vinayaka, Anne Morgat, Thierry Lombardot, Jerven Bolleman, Nevila Nouspikel, Aleksandra Shypitsyna, Emanuele Alpi, Yongxing Chen, Anne Lise Veuthey, Andrew Nightingale, Béatrice A. Cuche, Alex Bateman, Ramona Britto, Alan Wilter Sousa da Silva, Jie Luo, Lionel Breuza, Marie Claude Blatter, Elena Cibrian-Uhalte, Michel Schneider, Chuming Chen, Michele Magrane, L Famiglietti, Meher Shruti Yerramalla, Lydie Bougueleret, Vivienne Baillie Gerritsen, Anne Estreicher, Dolnide Dornevil, Catherine Rivoire, Jian Zhang, S Staehli, Andrew Peter Cowley, Tony Wardell, Ivo Pedruzzi, Andrea H. Auchincloss, Salvo Paesano, Elisabeth Gasteiger, Luis Pureza, Marc Feuermann, Leslie Arminski, Xavier D. Martin, Teresa Batista Neto, Steven Rosanoff, Florence Jungo, Sandra Orchard, Claire O'Donovan, Elisabeth Coudert, Ricardo Antunes, Sandrine Pilbout, Vicente Lara, Arnaud Gos, Reija Hieta, Manuela Pruess, Joanna Arganiska, Edward Turner, Maurizio De Giorgi, M Doche, Cecilia N. Arighi, Michael Tognolli, Leyla Jael Garcia Castro, Lucila Aimo
Publikováno v:
Nucleic Acids Research
UniProt is an important collection of protein sequences and their annotations, which has doubled in size to 80 million sequences during the past year. This growth in sequences has prompted an extension of UniProt accession number space from 6 to 10 c
Publikováno v:
Bioinformatics, Vol. 30, No 14 (2014) pp. 1974-1982
Motivation: Post-translational modifications (PTMs) are important steps in the maturation of proteins. Several models exist to predict specific PTMs, from manually detected patterns to machine learning methods. On one hand, the manual detection of pa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a1b04c2a06bcb93751ad763b42ebd883
https://archive-ouverte.unige.ch/unige:40749
https://archive-ouverte.unige.ch/unige:40749
Publikováno v:
PROTEOMICS. 1:262-268
SWISS-PROT is a protein sequence database, which aims to be nonredundant, fully annotated and highly cross-referenced. Most eukaryotic gene products undergo co- and/or post-translational modifications, and these need to be included in the database in