Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Anne V. Brown"'
Autor:
Babu Valliyodan, Anne V. Brown, Juexin Wang, Gunvant Patil, Yang Liu, Paul I. Otyama, Rex T. Nelson, Tri Vuong, Qijian Song, Theresa A. Musket, Ruth Wagner, Pradeep Marri, Sam Reddy, Allen Sessions, Xiaolei Wu, David Grant, Philipp E. Bayer, Manish Roorkiwal, Rajeev K. Varshney, Xin Liu, David Edwards, Dong Xu, Trupti Joshi, Steven B. Cannon, Henry T. Nguyen
Publikováno v:
Scientific Data, Vol 8, Iss 1, Pp 1-9 (2021)
Measurement(s) genetic variation • SNP • Linkage Disequilibrium Technology Type(s) DNA sequencing • bioinformatics analysis • computational phylogenetic analysis Sample Characteristic - Organism Glycine soja • Glycine max Machine-accessible
Externí odkaz:
https://doaj.org/article/ae12fde97586471da4b7905eed2d153c
Autor:
Joel Berendzen, Anne V. Brown, Connor T. Cameron, Jacqueline D. Campbell, Alan M. Cleary, Sudhansu Dash, Samuel Hokin, Wei Huang, Scott R. Kalberer, Rex T. Nelson, Sven Redsun, Nathan T. Weeks, Andrew Wilkey, Andrew D. Farmer, Steven B. Cannon
Publikováno v:
Legume Science, Vol 3, Iss 3, Pp n/a-n/a (2021)
Abstract The Legume Information System (LIS; https://legumeinfo.org) houses genetic and genomic data, integrated in various online tools to allow comparative genomic analyses. The website and database maintain data for more than two dozen species, pa
Externí odkaz:
https://doaj.org/article/88581ad44e754a0bae55c177f02a8874
Autor:
Teshale Assefa, Paul I. Otyama, Anne V. Brown, Scott R. Kalberer, Roshan S. Kulkarni, Steven B. Cannon
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-12 (2019)
Abstract Background Breeding programs benefit from information about marker-trait associations for many traits, whether the goal is to place those traits under active selection or to maintain them through background selection. Association studies are
Externí odkaz:
https://doaj.org/article/fd049fb9dfe74d778f4ea800a62340fd
Publikováno v:
Plants, Vol 10, Iss 11, p 2494 (2021)
Seeds, especially those of certain grasses and legumes, provide the majority of the protein and carbohydrates for much of the world’s population. Therefore, improvements in seed quality and yield are important drivers for the development of new cro
Externí odkaz:
https://doaj.org/article/2940d8896feb40719bb5ea9f01029fd6
Autor:
Andrew Wilkey, Rex T. Nelson, Michelle A. Graham, Anne V. Brown, Nathan T. Weeks, Steven B. Cannon, David Grant, Wei Huang, Shawn I Conners
Publikováno v:
Nucleic Acids Res
SoyBase, a USDA genetic and genomics database, holds professionally curated soybean genetic and genomic data, which is integrated and made accessible to researchers and breeders. The site holds several reference genome assemblies, as well as genetic
Autor:
Sven, Redsun, Sam, Hokin, Connor T, Cameron, Alan M, Cleary, Joel, Berendzen, Sudhansu, Dash, Anne V, Brown, Andrew, Wilkey, Jacqueline D, Campbell, Wei, Huang, Scott R, Kalberer, Nathan T, Weeks, Steven B, Cannon, Andrew D, Farmer
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2443
In this chapter, we introduce the main components of the Legume Information System ( https://legumeinfo.org ) and several associated resources. Additionally, we provide an example of their use by exploring a biological question: is there a common mol
Autor:
Sven Redsun, Sam Hokin, Connor T. Cameron, Alan M. Cleary, Joel Berendzen, Sudhansu Dash, Anne V. Brown, Andrew Wilkey, Jacqueline D. Campbell, Wei Huang, Scott R. Kalberer, Nathan T. Weeks, Steven B. Cannon, Andrew D. Farmer
Publikováno v:
Plant Bioinformatics ISBN: 9781071620663
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b3ddb64f2fc0a09f6bf356b0d2f4cbd6
https://doi.org/10.1007/978-1-0716-2067-0_4
https://doi.org/10.1007/978-1-0716-2067-0_4
Autor:
Roshan Kulkarni, Anne V. Brown, Paul I. Otyama, Teshale Assefa, Steven B. Cannon, Scott R. Kalberer
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-12 (2019)
BMC Genomics
BMC Genomics
Background Breeding programs benefit from information about marker-trait associations for many traits, whether the goal is to place those traits under active selection or to maintain them through background selection. Association studies are also imp
Autor:
Asher Pasha, Rex T. Nelson, Millar Ah, Pitre F, Le C, Anne V. Brown, Lewis Lukens, Ehlting J, Ho C, Nicholas J. Provart, Brereton N, Eddi Esteban, Cornelia M. Hooper, Waese-Perlman B, Liu Y, Loren H. Rieseberg, Staton Se, Isobel A. P. Parkin, Azhieh A, Lau, Ly G, Jamie Waese, David Goodstein, Shelley Lumba, Sullivan A
ePlant was introduced in 2017 for exploring large Arabidopsis thaliana data sets from the kilometre to nanometre scales. In the past four years we have used the ePlant framework to develop ePlants for 15 agronomically-important species: maize, poplar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a2f83700871e0ae0a44cb99a860e08f6
https://doi.org/10.1101/2021.04.28.441805
https://doi.org/10.1101/2021.04.28.441805
Autor:
David Edwards, Sam Reddy, Philipp E. Bayer, Theresa A. Musket, Trupti Joshi, Allen Sessions, Babu Valliyodan, Anne V. Brown, Tri D. Vuong, Ruth Wagner, Rex T. Nelson, Manish Roorkiwal, Rajeev K. Varshney, Juexin Wang, Paul I. Otyama, Xiaolei Wu, Dong Xu, Steven B. Cannon, Pradeep Marri, Gunvant Patil, Xin Liu, Yang Liu, Henry T. Nguyen, Qijian Song, David Grant
Publikováno v:
Scientific Data, Vol 8, Iss 1, Pp 1-9 (2021)
Scientific Data
Scientific Data
We report characteristics of soybean genetic diversity and structure from the resequencing of 481 diverse soybean accessions, comprising 52 wild (Glycine soja) selections and 429 cultivated (Glycine max) varieties (landraces and elites). This data wa