A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen

Autor: Alice Feurtey, Cécile Lorrain, Megan C. McDonald, Andrew Milgate, Peter S. Solomon, Rachael Warren, Guido Puccetti, Gabriel Scalliet, Stefano F. F. Torriani, Lilian Gout, Thierry C. Marcel, Frédéric Suffert, Julien Alassimone, Anna Lipzen, Yuko Yoshinaga, Christopher Daum, Kerrie Barry, Igor V. Grigoriev, Stephen B. Goodwin, Anne Genissel, Michael F. Seidl, Eva H. Stukenbrock, Marc-Henri Lebrun, Gert H. J. Kema, Bruce A. McDonald, Daniel Croll

Publikováno v: Nature Communications, Vol 14, Iss 1, Pp 1-15 (2023)

Zymoseptoria tritici is an important fungal pathogen of wheat which has spread globally. Here, the authors perform genomic analyses on a collection of ~1100 Z. tritici samples from 42 countries to describe its global spread and elucidate mechanisms o

Externí odkaz: https://doaj.org/article/f787be13bf5f4a1b9f95e4647bcf52cf

Association Genetics in Plant Pathogens: Minding the Gap between the Natural Variation and the Molecular Function

Autor: Anne Genissel, Johann Confais, Marc-Henri Lebrun, Lilian Gout

Publikováno v: Frontiers in Plant Science, Vol 8 (2017)

Externí odkaz: https://doaj.org/article/2bf13506896f4ef6b98db3ee31fee9aa

Improved gene annotation of the fungal wheat pathogenZymoseptoria triticibased on combined Iso-Seq and RNA-Seq evidence

Autor: Nicolas Lapalu, Lucie Lamothe, Yohann Petit, Anne Genissel, Camille Delude, Alice Feurtey, Leen N. Abraham, Dan Smith, Robert King, Alison Renwick, Mélanie Appertet, Justine Sucher, Andrei S. Steindorff, Stephen B. Goodwin, Igor V. Grigoriev, James Hane, Jason Rudd, Eva Stukenbrock, Daniel Croll, Gabriel Scalliet, Marc-Henri Lebrun

Despite large omics datasets, the establishment of a reliable gene annotation is still challenging for eukaryotic genomes. Here, we used the reference genome of the major fungal wheat pathogenZymoseptoria tritici(isolate IPO323) as a case study to de

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::961dc58764188cfba02ec5cc9599c7f4
https://doi.org/10.1101/2023.04.26.537486

Evolution and Plasticity of the Transcriptome Under Temperature Fluctuations in the Fungal Plant Pathogen Zymoseptoria tritici

Autor: Arnaud Le Rouzic, Anne Genissel, Arthur J. Jallet

Publikováno v: Frontiers in Microbiology
Frontiers in Microbiology, Frontiers Media, 2020, 11, 18 p. ⟨10.3389/fmicb.2020.573829⟩
Frontiers in Microbiology, Vol 11 (2020)
Frontiers in Microbiology, 2020, 11, 18 p. ⟨10.3389/fmicb.2020.573829⟩

– Background. Species are subjected to variable environment in nature. While the ability to cope with changes has been studied through theoretical approaches, the small number of empirical studies limits our understanding of the evolutionary molecu

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::951fb51b04c4a393104c6571091aa735
https://hal.inrae.fr/hal-02983043

Quantitative Trait Loci Affecting Phenotypic Plasticity and the Allometric Relationship of Ovariole Number and Thorax Length in Drosophila melanogaster

Autor: Alan O. Bergland, Anne Genissel, Marc Tatar, Sergey V. Nuzhdin

Publikováno v: Genetics. 180:567-582

Environmental factors during juvenile growth such as temperature and nutrition have major effects on adult morphology and life-history traits. In Drosophila melanogaster, ovary size, measured as ovariole number, and body size, measured as thorax leng

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7e5af5d63c90efc93ea33b1b9707233a
https://doi.org/10.1534/genetics.108.088906