Assessing Low-Intensity Relationships in Complex Networks.

Autor: Andreas Spitz, Anna Gimmler, Thorsten Stoeck, Katharina Anna Zweig, Emőke-Ágnes Horvát

Publikováno v: PLoS ONE, Vol 11, Iss 4, p e0152536 (2016)

Many large network data sets are noisy and contain links representing low-intensity relationships that are difficult to differentiate from random interactions. This is especially relevant for high-throughput data from systems biology, large-scale eco

Externí odkaz: https://doaj.org/article/0bcde7d28b4f4ccabc4050974aac2d46

The Tara Oceans voyage reveals global diversity and distribution patterns of marine planktonic ciliates

Autor: Stéphane Audic, Anna Gimmler, Ralf Korn, Colomban de Vargas, Thorsten Stoeck

Publikováno v: Scientific Reports
Scientific Reports, 2016, 6, pp.33555. ⟨10.1038/srep33555⟩
Scientific Reports, Nature Publishing Group, 2016, 6, pp.33555. ⟨10.1038/srep33555⟩

Illumina reads of the SSU-rDNA-V9 region obtained from the circumglobal Tara Oceans expedition allow the investigation of protistan plankton diversity patterns on a global scale. We analyzed 6,137,350 V9-amplicons from ocean surface waters and the de

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::375f784442f8f0d30b04fd134850876e
https://publica.fraunhofer.de/handle/publica/246498

Mining environmental high-throughput sequence data sets to identify divergent amplicon clusters for phylogenetic reconstruction and morphotype visualization

Autor: Anna, Gimmler, Thorsten, Stoeck

Publikováno v: Environmental microbiology reports. 7(4)

Environmental high-throughput sequencing (envHTS) is a very powerful tool, which in protistan ecology is predominantly used for the exploration of diversity and its geographic and local patterns. We here used a pyrosequenced V4-SSU rDNA data set from

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid________::9041a7a11b1b491a5e3f94d81d1cfe52
https://pubmed.ncbi.nlm.nih.gov/26061246