Combined Transcriptomic and Proteomic Profiling of E. coli under Microaerobic versus Aerobic Conditions: The Multifaceted Roles of Noncoding Small RNAs and Oxygen-Dependent Sensing in Global Gene Expression Control

Autor: Gunn-Guang Liou, Anna Chao Kaberdina, Wei-Syuan Wang, Vladimir R. Kaberdin, Sue Lin-Chao

Publikováno v: International Journal of Molecular Sciences; Volume 23; Issue 5; Pages: 2570
Addi. Archivo Digital para la Docencia y la Investigación
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Universidad de Cantabria (UC)

Adaptive mechanisms that facilitate intestinal colonization by the human microbiota, including Escherichia coli, may be better understood by analyzing the physiology and gene expression of bacteria in low-oxygen environments. We used high-throughput

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7956ccb15b81a8b96a49694649ba33d5
http://hdl.handle.net/10810/55919

Reprogramming of gene expression in Escherichia coli cultured on pyruvate versus glucose

Autor: Anna Chao Kaberdina, Sue Lin-Chao, Olatz Ruiz-Larrabeiti, Vladimir R. Kaberdin

Publikováno v: Addi. Archivo Digital para la Docencia y la Investigación
instname

Previous studies revealed important roles of small RNAs (sRNAs) in regulation of bacterial metabolism, stress responses and virulence. However, only a minor fraction of sRNAs is well characterized with respect to the spectra of their targets, conditi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cb26bec55f76b6b57c7b78e5a16f29f3
http://hdl.handle.net/10810/36663

Isolation of Pseudomonas fluorescens species highly resistant to pentachlorobenzene

Autor: Elena Sevillano, Itxaso Montánchez, Susana Rodriguez-Couto, Lucía Gallego, Vladimir R. Kaberdin, Anna Chao Kaberdina

Publikováno v: Folia microbiologica. 62(4)

Polychlorinated aromatic compounds, including pentachlorobenzenes and hexachlorobenzenes, are recalcitrant industrial pollutants that cause adverse effects on living cells. In this paper, the isolation of Pseudomonas fluorescens species with high res

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7edd3e5154ea2e15d642abb1d979dfb6
https://pubmed.ncbi.nlm.nih.gov/28188482

An Unexpected Type of Ribosomes Induced by Kasugamycin: A Look into Ancestral Times of Protein Synthesis?

Autor: Isabella Moll, Knud H. Nierhaus, Anna Chao Kaberdina, Witold Szaflarski

Publikováno v: Molecular Cell. 33:227-236

Translation of leaderless mRNAs, lacking ribosomal recruitment signals other than the 5'-terminal AUG-initiating codon, occurs in all three domains of life. Contemporary leaderless mRNAs may therefore be viewed as molecular fossils resembling ancestr

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9f46cbda11b1fa31140e2f4826a816ff
https://doi.org/10.1016/j.molcel.2008.12.014