Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Angela M Taravella"'
Autor:
Kimberly F McManus, Angela M Taravella, Brenna M Henn, Carlos D Bustamante, Martin Sikora, Omar E Cornejo
Publikováno v:
PLoS Genetics, Vol 13, Iss 3, p e1006560 (2017)
The human DARC (Duffy antigen receptor for chemokines) gene encodes a membrane-bound chemokine receptor crucial for the infection of red blood cells by Plasmodium vivax, a major causative agent of malaria. Of the three major allelic classes segregati
Externí odkaz:
https://doaj.org/article/a8019be581f548d5ba90a9f82a765938
Publikováno v:
BMC Medical Genomics, Vol 15, Iss 1, Pp 1-15 (2022)
Abstract Background Neanderthal introgressed DNA has been linked to different normal and disease traits including immunity and metabolism—two important functions that are altered in liver cancer. However, there is limited understanding of the relat
Externí odkaz:
https://doaj.org/article/a6681f0f943c41d9aff9d6d0be85f15a
Autor:
Arang Rhie, Sergey Nurk, Monika Cechova, Savannah J. Hoyt, Dylan J. Taylor, Nicolas Altemose, Paul W. Hook, Sergey Koren, Mikko Rautiainen, Ivan A. Alexandrov, Jamie Allen, Mobin Asri, Andrey V. Bzikadze, Nae-Chyun Chen, Chen-Shan Chin, Mark Diekhans, Paul Flicek, Giulio Formenti, Arkarachai Fungtammasan, Carlos Garcia Giron, Erik Garrison, Ariel Gershman, Jennifer Gerton, Patrick G.S. Grady, Andrea Guarracino, Leanne Haggerty, Reza Halabian, Nancy F. Hansen, Robert Harris, Gabrielle A. Hartley, William T. Harvey, Marina Haukness, Jakob Heinz, Thibaut Hourlier, Robert M. Hubley, Sarah E. Hunt, Stephen Hwang, Miten Jain, Rupesh K. Kesharwani, Alexandra P. Lewis, Heng Li, Glennis A. Logsdon, Julian K. Lucas, Wojciech Makalowski, Christopher Markovic, Fergal J. Martin, Ann M. Mc Cartney, Rajiv C. McCoy, Jennifer McDaniel, Brandy M. McNulty, Paul Medvedev, Alla Mikheenko, Katherine M. Munson, Terence D. Murphy, Hugh E. Olsen, Nathan D. Olson, Luis F. Paulin, David Porubsky, Tamara Potapova, Fedor Ryabov, Steven L. Salzberg, Michael E.G. Sauria, Fritz J. Sedlazeck, Kishwar Shafin, Valery A. Shepelev, Alaina Shumate, Jessica M. Storer, Likhitha Surapaneni, Angela M. Taravella Oill, Françoise Thibaud-Nissen, Winston Timp, Marta Tomaszkiewicz, Mitchell R. Vollger, Brian P. Walenz, Allison C. Watwood, Matthias H. Weissensteiner, Aaron M. Wenger, Melissa A. Wilson, Samantha Zarate, Yiming Zhu, Justin M. Zook, Evan E. Eichler, Rachel O’Neill, Michael C. Schatz, Karen H. Miga, Kateryna D. Makova, Adam M. Phillippy
The human Y chromosome has been notoriously difficult to sequence and assemble because of its complex repeat structure including long palindromes, tandem repeats, and segmental duplications. As a result, more than half of the Y chromosome is missing
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d38b477c2daccca72d1302cd2225927d
https://doi.org/10.1101/2022.12.01.518724
https://doi.org/10.1101/2022.12.01.518724
Autor:
Krishna R. Veeramah, Feichen Shen, Adam R. Boyko, Angela M. Taravella, Jeffrey M. Kidd, S. Emery, Amanda L. Pendleton
Publikováno v:
BMC Biology, Vol 16, Iss 1, Pp 1-21 (2018)
BMC Biology
BMC Biology
Background Domesticated from gray wolves between 10 and 40 kya in Eurasia, dogs display a vast array of phenotypes that differ from their ancestors, yet mirror other domesticated animal species, a phenomenon known as the domestication syndrome. Here,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6c49818ff5f3b562ab52288aa95473d1
http://link.springer.com/article/10.1186/s12915-018-0535-2
http://link.springer.com/article/10.1186/s12915-018-0535-2
Publikováno v:
J Comput Biol
Germline genetic variation contributes to cancer etiology, but self-reported race is not always consistent with genetic ancestry, and samples may not have identifying ancestry information. Here we describe a flexible computational pipeline, PopInf, t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1beda54dd866fb111340d9047f335081
https://doi.org/10.1101/823344
https://doi.org/10.1101/823344
Autor:
Karl-Göran Sjögren, Nina Lau, Nikolay N. Kradin, Igor Kukushkin, Arman Beisenov, Kadicha Tashbaeva, Andrey Logvin, Peter de Barros Damgaard, Irina Shevnina, Viktor K. Mertz, Ilya V. Mertz, Alexander Tkachev, Amy Goldberg, Zaruhi Khachatryan, Vyacheslav Moiyesev, Nina Marchi, Valeriy Evdokimov, Gabit Baimbetov, Valeriy Loman, Turaly Tulegenov, Evgeniy Dmitriev, Kasper Nielsen, Diimaajav Erdenebaatar, Lotte Hedeager, Levon Yepiskoposyan, Almaz Aldashev, Egor Kitov, Evelyne Heyer, Kristian Kristiansen, Victor Varfolomeev, Nurbol Baimukhanov, Enkhbayar Mijiddorj, Tereza Štolcová, Melissa A. Wilson Sayres, Sturla Ellingvåg, Dmitriy Voyakin, Gennady Afanasiev, Simon Rasmussen, Anders Gorm Pedersen, Ashyk Alpaslan, Mikkel Winther Pedersen, Ashot Margaryan, Sainbileg Undrakhbold, Z. Orozbekova, Bekmukhanbet Nurmukhanbetov, Tabaldiev Kubatbek, Eske Willerslev, Andrey Gromov, Ruslan Khaskhanov, Hakon Hakonarson, Alina Kolbina, Václav Smrčka, Rasmus Nielsen, Morten E. Allentoft, Gulmira Mukhtarova, Martin Sikora, Gabriel Renaud, J. Víctor Moreno-Mayar, Bazartseren Boldgiv, Angela M. Taravella, Tatyana Hegay, Choduraa Dorzhu, Emma Usmanova, Karol Pieta, Inga Merkyte, Alexey Kukushkin, Michaël Peyrot, Kunbolot Akmatov, Karin Margarita Frei, Vladimir I. Bazaliiskii, Thorfinn Sand Korneliussen, Alexander Goryachev, Ludovic Orlando, Andrzej W. Weber, Irina P. Panyushkina, Rana Dajani, Bazartseren Boldbaatar
Publikováno v:
Nature
Nature, Nature Publishing Group, 2018, 557 (7705), pp.369-374. ⟨10.1038/s41586-018-0094-2⟩
Damgaard, P D B, Marchi, N, Rasmussen, S, Frei, K M & Willerslev, E 2018, ' 137 ancient human genomes from across the Eurasian steppes ', Nature, vol. 557, pp. 369-374 . https://doi.org/10.1038/s41586-018-0094-2
Nature, 557, 369-374
Nature, Nature Publishing Group, 2018, 557 (7705), pp.369-374. ⟨10.1038/s41586-018-0094-2⟩
Damgaard, P D B, Marchi, N, Rasmussen, S, Frei, K M & Willerslev, E 2018, ' 137 ancient human genomes from across the Eurasian steppes ', Nature, vol. 557, pp. 369-374 . https://doi.org/10.1038/s41586-018-0094-2
Nature, 557, 369-374
For thousands of years the Eurasian steppes have been a centre of human migrations and cultural change. Here we sequence the genomes of 137 ancient humans (about 1× average coverage), covering a period of 4,000 years, to understand the population hi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::beb3417d5c765686402cd4900f134874
https://hal.archives-ouvertes.fr/hal-02277549
https://hal.archives-ouvertes.fr/hal-02277549
Autor:
Shyamalika Gopalan, Martina Unterländer, Kevin G. Daly, Krishna R. Veeramah, Andrea Zeeb-Lanz, Joachim Burger, Rose-Marie Arbogast, Timo Seregély, Dean Bobo, Amelie Scheu, Shiya Song, Angela M. Taravella, Laura R. Botigué, Jeffrey M. Kidd, Matthew T. Oetjens, Amanda L. Pendleton
Publikováno v:
Nature Communications
Nature Communications, Nature Publishing Group, 2017, 8 (1), ⟨10.1038/ncomms16082⟩
Nature Communications, Vol 8, Iss 1, Pp 1-11 (2017)
Nature Communications, Nature Publishing Group, 2017, 8 (1), ⟨10.1038/ncomms16082⟩
Nature Communications, Vol 8, Iss 1, Pp 1-11 (2017)
Europe has played a major role in dog evolution, harbouring the oldest uncontested Palaeolithic remains and having been the centre of modern dog breed creation. Here we sequence the genomes of an Early and End Neolithic dog from Germany, including a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c9bed94b1500b4e9750a4b24a5fbfa3b
https://doi.org/10.1038/ncomms16082
https://doi.org/10.1038/ncomms16082
Autor:
Adam R. Boyko, Krishna R. Veeramah, Feichen Shen, Jeffrey M. Kidd, S. Emery, Angela M. Taravella, Amanda L. Pendleton
BackgroundDogs (Canis lupus familiaris) were domesticated from gray wolves between 10-40 kya in Eurasia, yet details surrounding the process of domestication remain unclear. The vast array of phenotypes exhibited by dogs mirror other domesticated ani
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb0769cd1cbbf9d60490075c85bae7cf
https://doi.org/10.1101/118794
https://doi.org/10.1101/118794
Autor:
Carlos Bustamante, Martin Sikora, Kimberly F. McManus, Brenna M. Henn, Omar E. Cornejo, Angela M. Taravella
Publikováno v:
PLoS genetics, vol 13, iss 3
PLoS Genetics, vol 13, iss 3
PLoS Genetics, Vol 13, Iss 3, p e1006560 (2017)
PLoS Genetics
PLoS Genetics, vol 13, iss 3
PLoS Genetics, Vol 13, Iss 3, p e1006560 (2017)
PLoS Genetics
The human DARC (Duffy antigen receptor for chemokines) gene encodes a membrane-bound chemokine receptor crucial for the infection of red blood cells by Plasmodium vivax, a major causative agent of malaria. Of the three major allelic classes segregati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::00e8c203a63b4188fe745910ee6e580c
https://escholarship.org/uc/item/1366k7d8
https://escholarship.org/uc/item/1366k7d8
Publikováno v:
Genome Biology
Background The papaya Y-linked region showed clear population structure, resulting in the detection of the ancestral male population that domesticated hermaphrodite papayas were selected from. The same populations were used to study nucleotide divers
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cc9fa8f9042cc271ec258f1869450733
http://europepmc.org/articles/PMC5126825
http://europepmc.org/articles/PMC5126825