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Whole genome sequencing analysis of Mycobacterium tuberculosis reveals circulating strain types and drug-resistance mutations in the Philippines.

Autor: Wang L; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, WC1E 7HT, UK., Lim DR; National Tuberculosis Reference Laboratory, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., Phelan JE; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, WC1E 7HT, UK., Reyes LT; National Tuberculosis Reference Laboratory, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., Palparan AG; National Tuberculosis Reference Laboratory, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., Sanchez MGC; National Tuberculosis Reference Laboratory, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., Asuncion LAA; National Tuberculosis Reference Laboratory, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., Tujan MAA; National Tuberculosis Reference Laboratory, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., Medado IAP; Molecular Biology Laboratory, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., Daga CMA; Department of Epidemiology and Biostatistics, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., Llames JS; Philippine Genome Center, University of Philippines Diliman, Quezon City, Philippines., Mitarai S; Department of Mycobacterium Reference and Research, Research Institute of Tuberculosis, Japan Anti-Tuberculosis Association, Tokyo, Japan., Murase Y; Department of Mycobacterium Reference and Research, Research Institute of Tuberculosis, Japan Anti-Tuberculosis Association, Tokyo, Japan., Morishige Y; Department of Mycobacterium Reference and Research, Research Institute of Tuberculosis, Japan Anti-Tuberculosis Association, Tokyo, Japan., Ang CF; College of Medicine, University of the Philippines, Manila, Philippines., Malabad JCM; Department of Science and Technology, DOST Compound, Bicutan, Taguig City, Philippine, Philippines., Montoya JC; College of Medicine, University of the Philippines, Manila, Philippines., Hafalla JC; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, WC1E 7HT, UK., Campino S; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, WC1E 7HT, UK., Hibberd ML; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, WC1E 7HT, UK., Ama CG; National Tuberculosis Reference Laboratory, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., Basilio RP; National Tuberculosis Reference Laboratory, Research Institute for Tropical Medicine, Department of Health, Filinvest, Alabang, Muntinlupa City, Philippines., La Paz EMC; Philippine Genome Center, University of Philippines Diliman, Quezon City, Philippines.; College of Medicine, University of the Philippines, Manila, Philippines., Clark TG; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, WC1E 7HT, UK. Taane.clark@lshtm.ac.uk.; Department of Infectious Disease Epidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, UK. Taane.clark@lshtm.ac.uk.

Publikováno v: Scientific reports [Sci Rep] 2024 Aug 23; Vol. 14 (1), pp. 19602. Date of Electronic Publication: 2024 Aug 23.

High TB burden and low notification rates in the Philippines: The 2016 national TB prevalence survey.

Autor: Lansang MAD; Department of Clinical Epidemiology, College of Medicine, University of the Philippines, Manila, Philippines.; Division of Infectious Diseases, Department of Medicine, College of Medicine, University of the Philippines-Philippine General Hospital, Manila, Philippines., Alejandria MM; Department of Clinical Epidemiology, College of Medicine, University of the Philippines, Manila, Philippines.; Division of Infectious Diseases, Department of Medicine, College of Medicine, University of the Philippines-Philippine General Hospital, Manila, Philippines., Law I; Global Tuberculosis Programme, World Health Organization, Geneva, Switzerland., Juban NR; Department of Clinical Epidemiology, College of Medicine, University of the Philippines, Manila, Philippines., Amarillo MLE; Department of Clinical Epidemiology, College of Medicine, University of the Philippines, Manila, Philippines., Sison OT; Institute of Clinical Epidemiology, National Institutes of Health, University of the Philippines, Manila, Philippines., Cruz JRB; Foundation for the Advancement of Clinical Epidemiology, Manila, Philippines.; Social Innovation in Health Initiative, University of the Philippines, Manila, Philippines., Ang CF; Foundation for the Control of Infectious Diseases, Taft Avenue, Manila, Philippines., Buensalido JAL; Division of Infectious Diseases, Department of Medicine, College of Medicine, University of the Philippines-Philippine General Hospital, Manila, Philippines., Cañal JPA; Department of Radiology, University of the Philippines College of Medicine, University of the Philippines, Manila, Philippines.; Philippine College of Radiology, Quezon City, Philippines., Castillo-Carandang NT; Department of Clinical Epidemiology, College of Medicine, University of the Philippines, Manila, Philippines.; Institute of Clinical Epidemiology, National Institutes of Health, University of the Philippines, Manila, Philippines., Cordero CP; Department of Clinical Epidemiology, College of Medicine, University of the Philippines, Manila, Philippines., Gaviola DMG; Department of Health, National TB Control Program, Manila, Philippines., Ladia MAJ; Institute of Clinical Epidemiology, National Institutes of Health, University of the Philippines, Manila, Philippines., Mantaring JBV 3rd; Department of Clinical Epidemiology, College of Medicine, University of the Philippines, Manila, Philippines.; Foundation for the Advancement of Clinical Epidemiology, Manila, Philippines., Mendoza MT; Division of Infectious Diseases, Department of Medicine, College of Medicine, University of the Philippines-Philippine General Hospital, Manila, Philippines.; Foundation for the Control of Infectious Diseases, Taft Avenue, Manila, Philippines., Salamat MSS; Division of Infectious Diseases, Department of Medicine, College of Medicine, University of the Philippines-Philippine General Hospital, Manila, Philippines., Lam HY; Department of Clinical Epidemiology, College of Medicine, University of the Philippines, Manila, Philippines.; Institute of Health Policy and Development Studies, University of the Philippines, Manila, Philippines., Tadolini M; Infectious Diseases Unit, IRCCS Azienda Ospedaliero-Universitaria di Bologna, Policlinico di Sant'Orsola, Bologna, Italy.; Department of Medical and Surgical Sciences, Alma Mater Studiorum University of Bologna, Bologna, Italy., Garfin AMCG; Department of Health, National TB Control Program, Manila, Philippines.

Publikováno v: PloS one [PLoS One] 2021 Jun 04; Vol. 16 (6), pp. e0252240. Date of Electronic Publication: 2021 Jun 04 (Print Publication: 2021).

Whole-genome sequencing and single nucleotide polymorphisms in multidrug-resistant clinical isolates of Mycobacterium tuberculosis from the Philippines.

Autor: Roa MB; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines., Tablizo FA; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines., Morado EKD; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines., Cunanan LF; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines., Uy IDC; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines., Ng KCS; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines., Manalastas-Cantos KG; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines., Reyes JM; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines., Ganchua SKC; Institute of Molecular Biology and Biochemistry, National Institutes of Health, University of the Philippines-Manila, Ermita, Manila 1000, Philippines., Ang CF; Section of Infectious Diseases, Philippine General Hospital, University of the Philippines-Manila, Ermita, Manila 1000, Philippines., Kato-Maeda M; University of California, San Francisco, San Francisco General Hospital, Division of Pulmonary and Critical Care Medicine, 1001 Potrero Avenue, Mail Box 0841, San Francisco, CA 94110, USA., Cattamanchi A; University of California, San Francisco, San Francisco General Hospital, Division of Pulmonary and Critical Care Medicine, 1001 Potrero Avenue, Mail Box 0841, San Francisco, CA 94110, USA., Karaoz U; Climate and Ecosystems Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA., Destura RV; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines; Institute of Molecular Biology and Biochemistry, National Institutes of Health, University of the Philippines-Manila, Ermita, Manila 1000, Philippines. Electronic address: rvdestura@up.edu.ph., Lluisma AO; Philippine Genome Center, University of the Philippines, Diliman, Quezon City 1101, Philippines; Marine Science Institute, University of the Philippines, Diliman, Quezon City 1101, Philippines. Electronic address: aolluisma@up.edu.ph.

Publikováno v: Journal of global antimicrobial resistance [J Glob Antimicrob Resist] 2018 Dec; Vol. 15, pp. 239-245. Date of Electronic Publication: 2018 Aug 18.