Zobrazeno 1 - 10
of 80
pro vyhledávání: '"Andrey Sivachenko"'
Autor:
Angela N Brooks, Peter S Choi, Luc de Waal, Tanaz Sharifnia, Marcin Imielinski, Gordon Saksena, Chandra Sekhar Pedamallu, Andrey Sivachenko, Mara Rosenberg, Juliann Chmielecki, Michael S Lawrence, David S DeLuca, Gad Getz, Matthew Meyerson
Publikováno v:
PLoS ONE, Vol 9, Iss 1, p e87361 (2014)
Although recurrent somatic mutations in the splicing factor U2AF1 (also known as U2AF35) have been identified in multiple cancer types, the effects of these mutations on the cancer transcriptome have yet to be fully elucidated. Here, we identified sp
Externí odkaz:
https://doaj.org/article/0ed24c85ef0e4b54b65f5d4ffd3aec84
Autor:
Kevin C Miranda, Daniel T Bond, Joshua Z Levin, Xian Adiconis, Andrey Sivachenko, Carsten Russ, Dennis Brown, Chad Nusbaum, Leileata M Russo
Publikováno v:
PLoS ONE, Vol 9, Iss 5, p e96094 (2014)
Intact RNA from exosomes/microvesicles (collectively referred to as microvesicles) has sparked much interest as potential biomarkers for the non-invasive analysis of disease. Here we use the Illumina Genome Analyzer to determine the comprehensive arr
Externí odkaz:
https://doaj.org/article/f1c6c8df21b9454686325ab4c2372ccc
Autor:
Kimberly Stegmaier, Jaume Mora, Gad Getz, Todd R. Golub, Mark D. Fleming, Carlos Rodriguez-Galindo, Miguel N. Rivera, Angela Schwarz-Cruz y Celis, Ivan Imaz-Rosshandler, Matthew DeFelice, Brendan Blumenstiel, Sara Seepo, Daniel Auclair, Lauren Ambrogio, Mara Rosenberg, Petar Stojanov, Michael S. Lawrence, Kristian Cibulskis, Andrey Sivachenko, Aaron McKenna, Mariona Suñol, Cinzia Lavarino, Carmen de Torres, Aaron R. Thorner, Swapnil S. Mehta, Sachet A. Shukla, Scott L. Carter, Adam Kiezun, Monica L. Calicchio, Kyle C. Kurek, Gabriela Alexe, Amaro Taylor-Weiner, Chip Stewart, Brian D. Crompton
This file contains supplementary methods, supplementary references, supplementary figures S1-S6, supplementary tables S1, S3-S6, S8-S15, and S17, and legends for all supplementary figures and tables. Supplementary Figure S1. Summary of Ewing sarcoma
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9f9fa9a2acd9aa5b17ee580f829aa8bd
https://doi.org/10.1158/2159-8290.22530080
https://doi.org/10.1158/2159-8290.22530080
Autor:
Kimberly Stegmaier, Jaume Mora, Gad Getz, Todd R. Golub, Mark D. Fleming, Carlos Rodriguez-Galindo, Miguel N. Rivera, Angela Schwarz-Cruz y Celis, Ivan Imaz-Rosshandler, Matthew DeFelice, Brendan Blumenstiel, Sara Seepo, Daniel Auclair, Lauren Ambrogio, Mara Rosenberg, Petar Stojanov, Michael S. Lawrence, Kristian Cibulskis, Andrey Sivachenko, Aaron McKenna, Mariona Suñol, Cinzia Lavarino, Carmen de Torres, Aaron R. Thorner, Swapnil S. Mehta, Sachet A. Shukla, Scott L. Carter, Adam Kiezun, Monica L. Calicchio, Kyle C. Kurek, Gabriela Alexe, Amaro Taylor-Weiner, Chip Stewart, Brian D. Crompton
Variants identified from WES of 92 tumors after filtering.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4c7b338c898e7488e092dfc96651fc5b
https://doi.org/10.1158/2159-8290.22530068
https://doi.org/10.1158/2159-8290.22530068
Autor:
Kimberly Stegmaier, Jaume Mora, Gad Getz, Todd R. Golub, Mark D. Fleming, Carlos Rodriguez-Galindo, Miguel N. Rivera, Angela Schwarz-Cruz y Celis, Ivan Imaz-Rosshandler, Matthew DeFelice, Brendan Blumenstiel, Sara Seepo, Daniel Auclair, Lauren Ambrogio, Mara Rosenberg, Petar Stojanov, Michael S. Lawrence, Kristian Cibulskis, Andrey Sivachenko, Aaron McKenna, Mariona Suñol, Cinzia Lavarino, Carmen de Torres, Aaron R. Thorner, Swapnil S. Mehta, Sachet A. Shukla, Scott L. Carter, Adam Kiezun, Monica L. Calicchio, Kyle C. Kurek, Gabriela Alexe, Amaro Taylor-Weiner, Chip Stewart, Brian D. Crompton
Pediatric Ewing sarcoma is characterized by the expression of chimeric fusions of EWS and ETS family transcription factors, representing a paradigm for studying cancers driven by transcription factor rearrangements. In this study, we describe the som
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::285f277c0a412b54bb52bd7d1d0693b6
https://doi.org/10.1158/2159-8290.c.6546101
https://doi.org/10.1158/2159-8290.c.6546101
Autor:
Peter S. Hammerman, Matthew Meyerson, Robert I. Haddad, Kwok-Kin Wong, Gad Getz, Nathanael S. Gray, D. Neil Hayes, Chandra Sekhar Pedamallu, Trevor J. Pugh, Qingsong Liu, Ellen M. Beauchamp, Andrey Sivachenko, Matthew D. Wilkerson, Jeremy Tchaicha, Joonil Jung, Rachel G. Liao
A comprehensive description of genomic alterations in lung squamous cell carcinoma (lung SCC) has recently been reported, enabling the identification of genomic events that contribute to the oncogenesis of this disease. In lung SCC, one of the most f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::79a2d659ab57fc5cdb68f822dad89ade
https://doi.org/10.1158/0008-5472.c.6505725
https://doi.org/10.1158/0008-5472.c.6505725
Autor:
Peter S. Hammerman, Matthew Meyerson, Robert I. Haddad, Kwok-Kin Wong, Gad Getz, Nathanael S. Gray, D. Neil Hayes, Chandra Sekhar Pedamallu, Trevor J. Pugh, Qingsong Liu, Ellen M. Beauchamp, Andrey Sivachenko, Matthew D. Wilkerson, Jeremy Tchaicha, Joonil Jung, Rachel G. Liao
PDF file - 159K, Ba/F3 data with six additional inhibitors.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::00b6d563137e1384903aabd939d0c0a4
https://doi.org/10.1158/0008-5472.22400934
https://doi.org/10.1158/0008-5472.22400934
Autor:
Peter S. Hammerman, Matthew Meyerson, Robert I. Haddad, Kwok-Kin Wong, Gad Getz, Nathanael S. Gray, D. Neil Hayes, Chandra Sekhar Pedamallu, Trevor J. Pugh, Qingsong Liu, Ellen M. Beauchamp, Andrey Sivachenko, Matthew D. Wilkerson, Jeremy Tchaicha, Joonil Jung, Rachel G. Liao
PDF file - 203K, Extracellular domain dimerization studies.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::200828b789c89b3aaf5bc4697bd4857b
https://doi.org/10.1158/0008-5472.22400940.v1
https://doi.org/10.1158/0008-5472.22400940.v1
Autor:
Peter S. Hammerman, Matthew Meyerson, Robert I. Haddad, Kwok-Kin Wong, Gad Getz, Nathanael S. Gray, D. Neil Hayes, Chandra Sekhar Pedamallu, Trevor J. Pugh, Qingsong Liu, Ellen M. Beauchamp, Andrey Sivachenko, Matthew D. Wilkerson, Jeremy Tchaicha, Joonil Jung, Rachel G. Liao
PDF file - 74K, FGFR inhibitors profiled in this study.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5788ae1020a0faa17db6562d3d774eab
https://doi.org/10.1158/0008-5472.22400922.v1
https://doi.org/10.1158/0008-5472.22400922.v1
Autor:
Peter S. Hammerman, Matthew Meyerson, Robert I. Haddad, Kwok-Kin Wong, Gad Getz, Nathanael S. Gray, D. Neil Hayes, Chandra Sekhar Pedamallu, Trevor J. Pugh, Qingsong Liu, Ellen M. Beauchamp, Andrey Sivachenko, Matthew D. Wilkerson, Jeremy Tchaicha, Joonil Jung, Rachel G. Liao
PDF file - 80K, Patient details in lung SqCC patients containing FGFR mutations.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::acc22e476e0ad680044d65359ad84784
https://doi.org/10.1158/0008-5472.22400925.v1
https://doi.org/10.1158/0008-5472.22400925.v1