Zobrazeno 1 - 10
of 26
pro vyhledávání: '"Andrew S. Warren"'
Autor:
James E. Hixson, Goo Jun, Lawrence C. Shimmin, Yizhi Wang, Guoqiang Yu, Chunhong Mao, Andrew S. Warren, Timothy D. Howard, Richard S. Vander Heide, Jennifer Van Eyk, Yue Wang, David M. Herrington
Publikováno v:
Scientific Reports, Vol 7, Iss 1, Pp 1-9 (2017)
Abstract We investigated the influence of genetic variants on atherosclerosis using whole exome sequencing in cases and controls from the autopsy study “Pathobiological Determinants of Atherosclerosis in Youth (PDAY)”. We identified a PDAY case g
Externí odkaz:
https://doaj.org/article/485c84a505f64a21bc57f4bf322cab09
Autor:
Andrew S. Warren, Kirsten Dansey, Jake F. Hemingway, Ben Starnes, Elina Quiroga, Niten Singh, Sara L. Zettervall
Publikováno v:
Journal of Vascular Surgery. 77:e262
Pathogens pose a major risk to human health globally, causing 44% of deaths in low-resource countries. Currently, there are over 500 known bacterial pathobionts, covering a wide range of functional capabilities. Some well-known pathobionts are well c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e8ab170e5849342c06d69297d73873f9
https://doi.org/10.1101/2022.11.10.515998
https://doi.org/10.1101/2022.11.10.515998
Autor:
Christopher L. Barrett, Fenix W.D. Huang, Thomas J.X. Li, Andrew S. Warren, Christian M. Reidys
This paper presents a novel virus surveillance framework, completely independent of phylogeny-based methods. The framework issues timely alerts with an accuracy exceeding 85% that are based on the co-evolutionary relations between sites of the viral
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0fb9e8b615589bd7da84edc87190d627
https://doi.org/10.1101/2022.08.05.22278480
https://doi.org/10.1101/2022.08.05.22278480
Autor:
Ian Davidson, Anil Vullikanti, Aparna Gupta, S. S. Ravi, Prathyush Sambaturu, Andrew S. Warren
Publikováno v:
AAAI
Improving the explainability of the results from machine learning methods has become an important research goal. Here, we study the problem of making clusters more interpretable by extending a recent approach of [Davidson et al., NeurIPS 2018] for co
Autor:
Zho. Wang, Ariane Khaledi, Alice C. McHardy, Anton Korobeynikov, A. Cristian, Gherman Uritskiy, Huijue Jia, Philip Thomas Lanken Conradsen Clausen, Till Strowig, Denis Bertrand, N. Smit, Niranjan Nagarajan, Enrico Seiler, Adam G. Thomas, David Koslicki, Piotr Wojtek Dabrowski, Vitor C. Piro, Andreas Bremges, L. Oliker, Petra Gastmeier, Steven Hofmeyr, Zhe Wang, Jason C. Kwan, Alessio Milanese, Tue Sparholt Jørgensen, Mohammed Alser, J. S. Porter, Alexander Sczyrba, Georg Zeller, Bernhard Y. Renard, Chenhao Li, Riccardo Vicedomini, Chengxuan Tong, Andrew S. Warren, Jaqueline J. Brito, Alexey Gurevich, Axel Kola, C.T. Brown, Julien Tremblay, Shinichi Sunagawa, F. Maechler, G. Robertson, Jakob Nybo Nissen, Ruben Garrido-Oter, Rob Egan, Simon Rasmussen, Katherine Yelick, Fernando Meyer, Zhengqiao Zhao, Daniel R Mende, Shanfeng Zhu, Lizhen Shi, F. Malcher-Miranda, Fengzhu Sun, Zi. Wang, Lars Hestbjerg Hansen, J. Buchmann, S. D. Kieser, Jie Zhu, E. M. Robertsen, Fantin Mesny, Sergey Nurk, Pierre Marijon, Dmitry Meleshko, Gail L. Rosen, Nicola Segata, Nathan LaPierre, Eugene Goltsman, Varuni Sarwal, Mirko Trajkovski, Dmitry Antipov, P. Huang, Vanesa R. Marcelino, Francesco Beghini, Antoine Limasset, Rayan Chikhi, Eleazar Eskin, M. A. Gray, Camille Marchet, Lucas Paoli, Adrian Fritz, Evangelos Georganas, Zhi-Luo Deng, T. Klemetsen, Hans-Joachim Ruscheweyh, Evan R. Rees, S. Häußler, Simona Radutoiu, Stéphane Hacquard, Paul Schulze-Lefert, Mikhail Kolmogorov, N. P. Willassen, Pierre Peterlongo, Knut Reinert, Claire Lemaitre, Ronghui You, Søren J. Sørensen, Aydin Buluc, Luiz Irber, Serghei Mangul, B. Chen, Aaron E. Darling
Evaluating metagenomic software is key for optimizing metagenome interpretation and focus of the community-driven initiative for the Critical Assessment of Metagenome Interpretation (CAMI). In its second challenge, CAMI engaged the community to asses
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::30f2c611599ba0fd5421c09bf5485486
https://doi.org/10.1101/2021.07.12.451567
https://doi.org/10.1101/2021.07.12.451567
Autor:
Joseph Outten, Andrew S. Warren
Publikováno v:
Journal of the Indian Institute of Science
Pangenomes are organized collections of the genomic information from related individuals or groups. Graphical pangenomics is the study of these pangenomes using graphical methods to identify and analyze genes, regions, and mutations of interest to an
Autor:
Ronald W. Kenyon, Veronika Vonstein, Hyunseung Yoo, Thomas Brettin, Alice R. Wattam, Chunhong Mao, Robert Olson, Emily M. Dietrich, Margo VanOeffelen, Andrew S. Warren, James J. Davis, Derya Aytan-Aktug, Marcus Nguyen, Rick Stevens, Dustin Machi, Gordon D. Pusch, Maulik Shukla
Publikováno v:
Brief Bioinform
Antimicrobial resistance (AMR) is a major global health threat that affects millions of people each year. Funding agencies worldwide and the global research community have expended considerable capital and effort tracking the evolution and spread of
Autor:
Naren Ramakrishnan, Mohammad Raihanul Islam, Debanjan Datta, Andrew S. Warren, Patrick Butler, Sathappan Muthiah
Toxin classification of protein sequences is a challenging task with real world applications in healthcare and synthetic biology. Due to an ever expanding database of proteins and the inordinate cost of manual annotation, automated machine learning b
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::48ee080d6793718dff6263f7a80b6aa5
Autor:
James Schlitt, Srinivasan Venkatramanan, Pyrros A Telionis, Andrei C. Bura, Dawen Xie, Henning S. Mortveit, Stephen Eubank, Richard Beckman, Young Yun Baek, Brian D. Klahn, Jiangzhuo Chen, Mark G. Orr, Christopher L. Barrett, Jim Walke, Mandy L. Wilson, Dustin Machi, Andrew S. Warren, Akhil Sai Peddireddy, Bryan Lewis, Chunhong Mao, Stefan Hoops, Joshua Goldstein, Przemyslaw J. Porebski, Aniruddha Adiga, Madhav V. Marathe, Golda Barrow, Fanchao Meng, Allan Dickerman, Erin Raymond
Publikováno v:
medRxiv
Global airline networks play a key role in the global importation of emerging infectious diseases. Detailed information on air traffic between international airports has been demonstrated to be useful in retrospectively validating and prospectively p
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2b37ec0823e46a739156da5d0023e61e