Zobrazeno 1 - 10
of 23
pro vyhledávání: '"Andrew R. Jackson"'
Autor:
Emily L. LaPlante, Alessandra Stürchler, Robert Fullem, David Chen, Anne C. Starner, Emmanuel Esquivel, Eric Alsop, Andrew R. Jackson, Ionita Ghiran, Getulio Pereira, Joel Rozowsky, Justin Chang, Mark B. Gerstein, Roger P. Alexander, Matthew E. Roth, Jeffrey L. Franklin, Robert J. Coffey, Robert L. Raffai, Isabelle M. Mansuy, Stavros Stavrakis, Andrew J. deMello, Louise C. Laurent, Yi-Ting Wang, Chia-Feng Tsai, Tao Liu, Jennifer Jones, Kendall Van Keuren-Jensen, Eric Van Nostrand, Bogdan Mateescu, Aleksandar Milosavljevic
Publikováno v:
Cell genomics, vol 3, iss 5
Although the role of RNA binding proteins (RBPs) in extracellular RNA (exRNA) biology is well established, their exRNA cargo and distribution across biofluids are largely unknown. To address this gap, we extend the exRNA Atlas resource by mapping exR
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::74746fd163b449889a453e8421173f54
https://escholarship.org/uc/item/0sd5f4jf
https://escholarship.org/uc/item/0sd5f4jf
Autor:
Sharon E. Plon, Lillian Ashmore, Aleksandar Milosavljevic, Peter B. McGarvey, Jimmy Zhen, Selina S. Dwight, Chris Bizon, Bradford C. Powell, Neethu Shah, Robert R. Freimuth, Clinical Genome (ClinGen) Resource, Piotr Pawliczek, Tristan Nelson, Matthew Wright, Ronak Y. Patel, Melissa J. Landrum, Sameer Paithankar, Andrew R. Jackson, Larry Babb, Natasha T. Strande
Publikováno v:
Human Mutation
Effective exchange of information about genetic variants is currently hampered by the lack of readily available globally unique variant identifiers that would enable aggregation of information from different sources. The ClinGen Allele Registry addre
Autor:
Saumya Das, K. Mark Ansel, Markus Bitzer, Xandra O. Breakefield, Alain Charest, David J. Galas, Mark B. Gerstein, Mihir Gupta, Aleksandar Milosavljevic, Michael T. McManus, Tushar Patel, Robert L. Raffai, Joel Rozowsky, Matthew E. Roth, Julie A. Saugstad, Kendall Van Keuren-Jensen, Alissa M. Weaver, Louise C. Laurent, Asim B. Abdel-Mageed, Catherine Adamidi, P. David Adelson, Kemal M. Akat, Eric Alsop, Jorge Arango, Neil Aronin, Seda Kilinc Avsaroglu, Azadeh Azizian, Leonora Balaj, Iddo Z. Ben-Dov, Karl Bertram, Robert Blelloch, Kimberly A. Bogardus, Xandra Owens Breakefield, George A. Calin, Bob S. Carter, Al Charest, Clark C. Chen, Tanuja Chitnis, Robert J. Coffey, Amanda Courtright-Lim, Amrita Datta, Peter DeHoff, Thomas G. Diacovo, David J. Erle, Alton Etheridge, Marc Ferrer, Jeffrey L. Franklin, Jane E. Freedman, Timur Galeev, Roopali Gandhi, Aitor Garcia, Mark Bender Gerstein, Vikas Ghai, Ionita Calin Ghiran, Maria D. Giraldez, Andrei Goga, Tasos Gogakos, Beatrice Goilav, Stephen J. Gould, Peixuan Guo, Fred Hochberg, Bo Huang, Matt Huentelman, Craig Hunter, Elizabeth Hutchins, Andrew R. Jackson, M. Yashar S. Kalani, Pinar Kanlikilicer, Reka Agnes Karaszti, Anastasia Khvorova, Yong Kim, Hogyoung Kim, Taek Kyun Kim, Robert Kitchen, Richard P. Kraig, Anna M. Krichevsky, Raymond Y. Kwong, Minyoung Lee, Noelle L’Etoile, Shawn E. Levy, Feng Li, Jenny Li, Xin Li, Gabriel Lopez-Berestein, Rocco Lucero, Bogdan Mateescu, A.C. Matin, Klaas E.A. Max, Thorsten R. Mempel, Cindy Meyer, Debasis Mondal, Kenneth Jay Mukamal, Oscar D. Murillo, Thangamani Muthukumar, Deborah A. Nickerson, Christopher J. O’Donnell, Dinshaw J. Patel, James G. Patton, Anu Paul, Elaine R. Peskind, Mitch A. Phelps, Chaim Putterman, Peter J. Quesenberry, Joseph F. Quinn, Saritha Ranabothu, Shannon Jiang Rao, Cristian Rodriguez-Aguayo, Anthony Rosenzweig, Marc S. Sabatine, Nikita A. Sakhanenko, Julie Anne Saugstad, Thomas D. Schmittgen, Neethu Shah, Ravi Shah, Kerby Shedden, Jian Shi, Anil K. Sood, Anuoluwapo Sopeyin, Ryan M. Spengler, Robert Spetzler, Srimeenakshi Srinivasan, Sai Lakshmi Subramanian, Manikkam Suthanthiran, Kahraman Tanriverdi, Yun Teng, Muneesh Tewari, William Thistlethwaite, Thomas Tuschl, Karolina Kaczor Urbanowicz, Kasey C. Vickers, Olivier Voinnet, Kai Wang, Zhiyun Wei, Howard L. Weiner, Zachary R. Weiss, Zev Williams, David T.W. Wong, Prescott G. Woodruff, Xinshu Xiao, Irene K. Yan, Ashish Yeri, Bing Zhang, Huang-Ge Zhang
Publikováno v:
Das, Saumya; Ansel, K Mark; Bitzer, Markus; Breakefield, Xandra O; Charest, Alain; Galas, David J; et al.(2019). The Extracellular RNA Communication Consortium: Establishing Foundational Knowledge and Technologies for Extracellular RNA Research. Cell, 177(2), 231-242. doi: 10.1016/j.cell.2019.03.023. UC San Diego: Retrieved from: http://www.escholarship.org/uc/item/42g411w7
© 2019 Elsevier Inc. The Extracellular RNA Communication Consortium (ERCC) was launched to accelerate progress in the new field of extracellular RNA (exRNA) biology and to establish whether exRNAs and their carriers, including extracellular vesicles
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::800e9cd219516f263350ecb4f3aff02d
https://europepmc.org/articles/PMC6601620/
https://europepmc.org/articles/PMC6601620/
Autor:
Oscar Murillo, David J. Galas, Andrew I. Su, Liang Wang, Saumya Das, Parham Nejad, Srimeenakshi Srinivasan, Aleksandar Milosavljevic, Andrew R. Jackson, Bridget Simonson, Xuan Zhang, Ashish Yeri, Navneet Dogra, Anil K. Sood, Alexander R. Pico, Stacey M. Gifford, Anders Riutta, Roopali Gandhi, Louise C. Laurent, Jennifer Jones, Neethu Shah, Carlos Cordon-Cardo, Kirsty Danielson, Timur R. Galeev, Matthew E. Roth, Kendall Van Keuren-Jensen, Robert R. Kitchen, Courtney Moeller, William Thistlethwaite, Allen Chung, Roger P. Alexander, David T.W. Wong, Jonathan Warrell, Tushar Patel, Justyna Filant, Kristina Hanspers, Gustavo Stolovitzky, Sai Lakshmi Subramanian, Leonora Balaj, David K. Wong, Mark Gerstein, Kei-Hoi Cheung, Sebastian Burgstaller-Muehlbacher, Ashutosh K. Tewari, Robert L. Raffai, Kamlesh K Yadav, Anu Paul, Benjamin H. Wunsch, Joel Rozowsky, Rocco Lucero, Lisa M. Miller Jenkins, Joshua T. Smith, Joshua A. Welsh, Ravi V. Shah, James A. Diao, Clara D. Laurent, Chunlei Wu, Mehmet Eren Ahsen
Publikováno v:
Murillo, Oscar D; Thistlethwaite, William; Rozowsky, Joel; Subramanian, Sai Lakshmi; Lucero, Rocco; Shah, Neethu; et al.(2019). exRNA Atlas Analysis Reveals Distinct Extracellular RNA Cargo Types and Their Carriers Present across Human Biofluids.. Cell, 177(2), 463-477.e15. doi: 10.1016/j.cell.2019.02.018. UC San Diego: Retrieved from: http://www.escholarship.org/uc/item/96q5s1gm
Cell, vol 177, iss 2
Cell, vol 177, iss 2
To develop a map of cell-cell communication mediated by extracellular RNA (exRNA), the NIH Extracellular RNA Communication Consortium created the exRNA Atlas resource (https://exrna-atlas.org). The Atlas version 4P1 hosts 5,309 exRNA-seq and exRNA qP
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::71c5e2f9959045be7579c2e8ebe7adec
http://www.escholarship.org/uc/item/96q5s1gm
http://www.escholarship.org/uc/item/96q5s1gm
Autor:
Carolin Kosiol, Belinda Giardine, Janet A. Hopkins, Andrew G. Clark, Ryan D. Hernandez, Peng Wang, Peter D. Stenson, Yu-Hui Rogers, Aaron L. Halpern, Andrew D. Kern, Webb Miller, Kymberlie H. Pepin, Melissa J. Hubisz, Kimberly D. Delehaunty, Robert E. Palermo, Matthew W. Hahn, Erica Sodergren, Brian P. Walenz, Scott M. Smith, Sandra L. Lee, Xiang Qin, Yucheng Feng, Ewen F. Kirkness, Vandita Joshi, Xiaoqiu Huang, Amanda F. Svatek, Fan Yang, Young Ho Kim, Laura Clarke, John E. Karro, Courtney Sherell White, Jessica Kolb, David Glenn Smith, Clay Davis, Jian Ma, Shobha Patil, Todd Wylie, Arian F.A. Smit, Shalini N. Jhangiani, Michael G. Katze, Edward V. Ball, Jennifer Godfrey, Heather A. Lawson, Brian J. Raney, Michael Holder, Ross C. Hardison, Christian J. Buhay, Zhangwan Li, Alicia Hawes, Eric J. Vallender, David A. Wheeler, James C. Wallace, Galt P. Barber, Jinchuan Xing, Yufeng Shen, Kayla E. Smith, Marvin Diep Dao, Jeffrey Rogers, Evan E. Eichler, Cynthia Pfannkoch, Jireh Santibanez, Kateryna D. Makova, Kashif Hirani, Robert M. Kuhn, Yanru Ren, David Neil Cooper, David Haussler, Carlos Bustamante, Adam Siepel, Mimi N. Chandrabose, Xiaoming Liu, George M. Weinstock, Teresa Utterback, Jarret Glasscock, Tomas Vinar, R. Alan Harris, Anis Karimpour-Fard, San Juana Ruiz, Lucinda Fulton, Asif T. Chinwalla, Aniko Sabo, Xinwei She, Charles Addo-Quaye, David L. Nelson, Lora Lewis, Hui Ke, Eli Venter, Donna M. Muzny, Alison Marklein, Bruce T. Lahn, Grace Pai, Brian W. Schneider, Shannon Dugan-Rocha, Henry Xing-Zhi Song, Jeremiah D. Degenhardt, Kyudong Han, Huaiyang Jiang, Stephanie M. Moore, Ian Schenck, Dinh Ngoc Ngo, Michael J. Cox, Heidie A. Paul, Ann S. Zwieg, Kim C. Worley, Craig Pohl, Rui Chen, Robert L. Strausberg, Ling-Ling Pu, Donna Karolchik, Jonathan R. Pollack, Geoffrey Okwuonu, Jennifer Hume, Elaine R. Mardis, David N. Messina, W. James Kent, William E. O'Brien, Fan Hsu, Andrew R. Jackson, Huyen Dinh, Hui Wang, LaDeana W. Hillier, Richard A. Gibbs, Alexandra Denby, Wesley C. Warren, Brygg Ullmer, Laura J. Dumas, Yih-shin Liu, Tony Attaway, Richard K. Wilson, Patrick Minx, James M. Sikela, Lan Zhang, Sandra Hines, Steven J. M. Jones, Amit Indap, Ze Cheng, Karin A. Remington, Stephanie Bell, Jungnam Lee, Kelly E. Bernard, Sang-Gook Han, Mariano Rocchi, Judith Hernandez, Betsy Ferguson, Hildegard Kehrer-Sawatzki, Ziad Khan, Aleksandar Milosavljevic, Joanne O. Nelson, Jeffery P. Demuth, Richard Burhans, David A. Parker, Lynne V. Nazareth, Roger E. Bumgarner, Marco A. Marra, Robert Baertsch, Andrew Cree, Paul Havlak, J. Craig Venter, Kay Prüfer, Rasmus Nielsen, Ewan Birney, Miriam K. Konkel, Mark A. Batzer, Arthur M. Lesk, Jacqueline E. Schein, Granger G. Sutton, Yan Ding, Yue Liu, Andy Peng Xiang, Miklós Csürös, Selina Vattathil, John W. Wallis, R. Gerald Fowler, Shiaw-Pyng Yang, Ramatu Ayiesha Gabisi, Toni T. Garner
Publikováno v:
Science. 316:222-234
The rhesus macaque ( Macaca mulatta ) is an abundant primate species that diverged from the ancestors of Homo sapiens about 25 million years ago. Because they are genetically and physiologically similar to humans, rhesus monkeys are the most widely u
Autor:
R. Alan Harris, Cristian Coarfa, Kevin Riehle, Vitor Onuchic, Andrew R. Jackson, Sai Lakshmi Subramanian, Aleksandar Milosavljevic, Tim Charnecki, Viren Amin, Sameer Paithankar
Publikováno v:
Nature Communications
Tissue-specific expression of lincRNAs suggests developmental and cell-type-specific functions, yet tissue specificity was established for only a small fraction of lincRNAs. Here, by analysing 111 reference epigenomes from the NIH Roadmap Epigenomics
Autor:
Zhengdong D. Zhang, Jun Wang, Zhu Chen, Will Gillett, George M. Weinstock, Guoping Zhao, LaRonda Jackson, Christopher K. Raymond, Manuel L. Gonzalez-Garay, Yang Zhou, Judith Hernandez, Boqin Qiang, James B. Clendenning, Zhijian J. Chen, Shannon Dugan-Rocha, Andrew R. Jackson, Zhijian Yao, Yan Shen, R. Alan Harris, Ziad Khan, Margaret Morgan, Wei Dong, Sharon Wei, Dawn Garcia, Aleksandar Milosavljevic, Maynard V. Olson, Ruben Rodriguez, Kerstin P. Clerc-Blankenburg, Ryan J. Lozado, Ralf Sudbrak, Jun Gu, Jing Kun Zhang, Heather R. Draper, Mary J. Brown, Channakhone Saenphimmachak, M. Ali Ansari-Lari, Songnian Hu, Preethi H. Gunaratne, Donna M. Muzny, Shiran Pasternak, Xing Zhi Song, Oliver Delgado, Bailin Hao, Lesette Perez, Charles Q. Adams, Michael L. Metzker, Anne Hodgson, Daniel Verduzco, Bao Viet Nguyen, Susan H. Kelly, Xin He, Jing Wang, Runsheng Chen, Karen A. Phelps, Rajinder Kaul, Guan Chen, Wei Huang, Huyen Dinh, Lenee Waldron, Paul Havlak, George Miner, Qiaoyan Wang, Ye Yuan, Rachel Gill, Anthony Palmeiri, Mathew W. Wright, Kim C. Worley, Michael Kube, Jing Liu, Clay Davis, Christian J. Buhay, Zhangwan Li, Jun Yu, Alicia Hawes, Jing Lu, Steffen Hennig, David L. Nelson, Rui Chen, Leni S. Jacob, Huanming Yang, Bin Liu, Steven E. Scherer, Christie Kovar-Smith, Jian Wang, Manjula Maheshwari, Gabrielle A. Williams, Paul E. Tabor, David A. Wheeler, Hans Lehrach, Graham R. Scott, Farah J.H. Plopper, Erica Sodergren, Wen Liu, Mulu Ayele, Richard Reinhardt, Richard A. Gibbs, Eric Haugen, Lora Lewis, Hua Shen, Gang Fu, Jianling Zhou, Xiuqing Zhang, Stephen Ernst, Geoffrey Okwuonu, Susan L. Naylor, Jennifer Hume, Ruth Levy, Andrew Cree, Yan Ding, David Steffen, Lynne V. Nazareth, Jireh Santibanez, Sandhya Subramanian, Gane Ka-Shu Wong
Publikováno v:
Muzny, D M, Scherer, S E, Kaul, R, Wang, J, Yu, J, Sudbrak, R, Buhay, C J, Chen, R, Cree, A, Ding, Y, Dugan-Rocha, S, Gill, R, Gunaratne, P, Harris, R A, Hawes, A C, Hernandez, J, Hodgson, A V, Hume, J, Jackson, A, Khan, Z M, Kovar-Smith, C, Lewis, L R, Lozado, R J, Metzker, M L, Milosavljevic, A, Miner, G R, Morgan, M B, Nazareth, L V, Scott, G, Sodergren, E, Song, X-Z, Steffen, D, Wei, S, Wheeler, D A, Wright, M W, Worley, K C, Yuan, Y, Zhang, Z, Adams, C Q, Ansari-Lari, M A, Ayele, M, Brown, M J, Chen, G, Chen, Z, Clendenning, J, Clerc-Blankenburg, K P, Chen, R, Chen, Z, Davis, C, Delgado, O, Dinh, H H, Dong, W, Draper, H, Ernst, S, Fu, G, Gonzalez-Garay, M L, Garcia, D K, Gillett, W, Gu, J, Hao, B, Haugen, E, Havlak, P, He, X, Hennig, S, Hu, S, Huang, W, Jackson, L R, Jacob, L S, Kelly, S H, Kube, M, Levy, R, Li, Z, Liu, B, Liu, J, Liu, W, Lu, J, Maheshwari, M, Nguyen, B-V, Okwuonu, G O, Palmeiri, A, Pasternak, S, Perez, L M, Phelps, K A, Plopper, F J H, Qiang, B, Raymond, C, Rodriguez, R, Saenphimmachak, C, Santibanez, J, Shen, H, Shen, Y, Subramanian, S, Tabor, P E, Verduzco, D, Waldron, L, Wang, J, Wang, J, Wang, Q, Williams, G A, Wong, G K-S, Yao, Z, Zhang, J, Zhang, X, Zhao, G, Zhou, J, Zhou, Y, Nelson, D, Lehrach, H, Reinhardt, R, Naylor, S L, Yang, H, Olson, M, Weinstock, G & Gibbs, R A 2006, ' The DNA sequence, annotation and analysis of human chromosome 3 ', Nature, vol. 440, no. 7088, pp. 1194-1198 . https://doi.org/10.1038/nature04728
Udgivelsesdato: 2006-Apr-27 After the completion of a draft human genome sequence, the International Human Genome Sequencing Consortium has proceeded to finish and annotate each of the 24 chromosomes comprising the human genome. Here we describe the
Autor:
Aleksandar Milosavljevic, Erica Sodergren, Miklós Csürös, Richard A. Gibbs, Andrew Cree, Ken J. Kalafus, Andrew R. Jackson, Ronald A. Harris, George M. Weinstock, Anne Hodgson, Weilie Dai, Pieter J. de Jong, Baoli Zhu
Publikováno v:
Genome Research. 15:292-301
Pooled genomic indexing (PGI) is a method for mapping collections of bacterial artificial chromosome (BAC) clones between species by using a combination of clone pooling and DNA sequencing. PGI has been used to map a total of 3858 BAC clones covering
Publikováno v:
Genome Research. 14:672-678
Pash is a computer program for efficient, parallel, all-against-all comparison of very long DNA sequences. Pash implements Positional Hashing, a novel parallelizable method for sequence comparison based on k-mer representation of sequences. The Posit
Publikováno v:
Cellular Immunology. 169:309-312
Thymocytes develop in close apposition to the stromal cells of the thymus. The ontogeny of thymocytes is dependent on intimate interactions between these cells and the stromal cells. The molecular mechanisms involved in regulating thymocyte–stromal