Zobrazeno 1 - 10
of 62
pro vyhledávání: '"Andrew D. L. Nelson"'
Publikováno v:
BMC Plant Biology, Vol 24, Iss 1, Pp 1-14 (2024)
Abstract Background In recent years, covalent modifications on RNA nucleotides have emerged as pivotal moieties influencing the structure, function, and regulatory processes of RNA Polymerase II transcripts such as mRNAs and lncRNAs. However, our und
Externí odkaz:
https://doaj.org/article/dbe0a14ac2dc4cdeb8a461c8cdd39926
Autor:
Marianne C. Kramer, Hee Jong Kim, Kyle R. Palos, Benjamin A. Garcia, Eric Lyons, Mark A. Beilstein, Andrew D. L. Nelson, Brian D. Gregory
Publikováno v:
Frontiers in Plant Science, Vol 13 (2022)
Long non-coding RNAs (lncRNAs) are an increasingly studied group of non-protein coding transcripts with a wide variety of molecular functions gaining attention for their roles in numerous biological processes. Nearly 6,000 lncRNAs have been identifie
Externí odkaz:
https://doaj.org/article/f8c901e7a40e49f3bc97039c662fb966
Autor:
Andrew D. L. Nelson, Grisel Ponciano, Colleen McMahan, Daniel C. Ilut, N. Ace Pugh, Diaa Eldin Elshikha, Douglas J. Hunsaker, Duke Pauli
Publikováno v:
BMC Plant Biology, Vol 19, Iss 1, Pp 1-13 (2019)
Abstract Background Guayule (Parthenium argentatum Gray) is a drought tolerant, rubber producing perennial shrub native to northern Mexico and the US Southwest. Hevea brasiliensis, currently the world’s only source of natural rubber, is grown as a
Externí odkaz:
https://doaj.org/article/99df45e68bac4f1bb22230339c623cfb
Autor:
Monika Chodasiewicz, Ewelina Maria Sokolowska, Anna C. Nelson-Dittrich, Aleksandra Masiuk, Juan Camilo Moreno Beltran, Andrew D. L. Nelson, Aleksandra Skirycz
Publikováno v:
Frontiers in Plant Science, Vol 11 (2020)
Plants exhibit different physiological and molecular responses to adverse changes in their environment. One such molecular response is the sequestration of proteins, RNAs, and metabolites into cytoplasmic bodies called stress granules (cSGs). Here we
Externí odkaz:
https://doaj.org/article/182d0fc01168470f8b20d350b5a25a59
Autor:
Marianne C. Kramer, Kevin A. Janssen, Kyle Palos, Andrew D. L. Nelson, Lee E. Vandivier, Benjamin A. Garcia, Eric Lyons, Mark A. Beilstein, Brian D. Gregory
Publikováno v:
Plant Direct, Vol 4, Iss 7, Pp n/a-n/a (2020)
Abstract After transcription, a messenger RNA (mRNA) is further post‐transcriptionally regulated by several features including RNA secondary structure and covalent RNA modifications (specifically N6‐methyladenosine, m6A). Both RNA secondary struc
Externí odkaz:
https://doaj.org/article/80905837322145e8b608b1550305e467
Autor:
Sateesh Peri, Sarah Roberts, Isabella R. Kreko, Lauren B. McHan, Alexandra Naron, Archana Ram, Rebecca L. Murphy, Eric Lyons, Brian D. Gregory, Upendra K. Devisetty, Andrew D. L. Nelson
Publikováno v:
Frontiers in Genetics, Vol 10 (2020)
Next-generation RNA-sequencing is an incredibly powerful means of generating a snapshot of the transcriptomic state within a cell, tissue, or whole organism. As the questions addressed by RNA-sequencing (RNA-seq) become both more complex and greater
Externí odkaz:
https://doaj.org/article/6711094ea7604af6beaf8dbe55e6218c
Autor:
Andrew D. L. Nelson, Evan S. Forsythe, Upendra K. Devisetty, David S. Clausen, Asher K. Haug-Batzell, Ari M. R. Meldrum, Michael R. Frank, Eric Lyons, Mark A. Beilstein
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 6, Iss 9, Pp 2881-2891 (2016)
Transcriptomic analyses from across eukaryotes indicate that most of the genome is transcribed at some point in the developmental trajectory of an organism. One class of these transcripts is termed long intergenic noncoding RNAs (lincRNAs). Recently,
Externí odkaz:
https://doaj.org/article/a4d252df15e847b5bac1b0ed10d2dd05
Autor:
Andrew D. L. Nelson, Upendra K. Devisetty, Kyle Palos, Asher K. Haug-Baltzell, Eric Lyons, Mark A. Beilstein
Publikováno v:
Frontiers in Genetics, Vol 8 (2017)
Long intergenic non-coding RNAs (lincRNAs) are an abundant and functionally diverse class of eukaryotic transcripts. Reported lincRNA repertoires in mammals vary, but are commonly in the thousands to tens of thousands of transcripts, covering ~90% of
Externí odkaz:
https://doaj.org/article/c05cf2d79db64a8083bd6293a559939b
Autor:
Andrew D. L. Nelson, Dorothy eShippen
Publikováno v:
Frontiers in Genetics, Vol 6 (2015)
Long noncoding RNAs (lncRNAs) evolve rapidly and are functionally diverse. The emergence of new lncRNAs is driven by genome disturbance events, including whole genome duplication, and transposition. One of the few lncRNAs with a conserved role throug
Externí odkaz:
https://doaj.org/article/2e9e94f4f4df4b3484df9e2822c79d48
Publikováno v:
The Plant Cell. 35:1762-1786
Long noncoding RNAs (lncRNAs) are a large and diverse class of genes in eukaryotic genomes that contribute to a variety of regulatory processes. Functionally characterized lncRNAs play critical roles in plants, ranging from regulating flowering to co