Zobrazeno 1 - 10
of 62
pro vyhledávání: '"Andrew D L Nelson"'
Publikováno v:
BMC Plant Biology, Vol 24, Iss 1, Pp 1-14 (2024)
Abstract Background In recent years, covalent modifications on RNA nucleotides have emerged as pivotal moieties influencing the structure, function, and regulatory processes of RNA Polymerase II transcripts such as mRNAs and lncRNAs. However, our und
Externí odkaz:
https://doaj.org/article/dbe0a14ac2dc4cdeb8a461c8cdd39926
Publikováno v:
PLoS Genetics, Vol 11, Iss 6, p e1005281 (2015)
Long noncoding RNAs (lncRNAs) have emerged as critical factors in many biological processes, but little is known about how their regulatory functions evolved. One of the best-studied lncRNAs is TER, the essential RNA template for telomerase reverse t
Externí odkaz:
https://doaj.org/article/64ca74a1f97c4f0f9272d09f5c13f9a8
Autor:
Marianne C. Kramer, Hee Jong Kim, Kyle R. Palos, Benjamin A. Garcia, Eric Lyons, Mark A. Beilstein, Andrew D. L. Nelson, Brian D. Gregory
Publikováno v:
Frontiers in Plant Science, Vol 13 (2022)
Long non-coding RNAs (lncRNAs) are an increasingly studied group of non-protein coding transcripts with a wide variety of molecular functions gaining attention for their roles in numerous biological processes. Nearly 6,000 lncRNAs have been identifie
Externí odkaz:
https://doaj.org/article/f8c901e7a40e49f3bc97039c662fb966
Autor:
Andrew D. L. Nelson, Grisel Ponciano, Colleen McMahan, Daniel C. Ilut, N. Ace Pugh, Diaa Eldin Elshikha, Douglas J. Hunsaker, Duke Pauli
Publikováno v:
BMC Plant Biology, Vol 19, Iss 1, Pp 1-13 (2019)
Abstract Background Guayule (Parthenium argentatum Gray) is a drought tolerant, rubber producing perennial shrub native to northern Mexico and the US Southwest. Hevea brasiliensis, currently the world’s only source of natural rubber, is grown as a
Externí odkaz:
https://doaj.org/article/99df45e68bac4f1bb22230339c623cfb
Publikováno v:
The Plant Cell. 35:1762-1786
Long noncoding RNAs (lncRNAs) are a large and diverse class of genes in eukaryotic genomes that contribute to a variety of regulatory processes. Functionally characterized lncRNAs play critical roles in plants, ranging from regulating flowering to co
Autor:
Marianne C. Kramer, Kevin A. Janssen, Kyle Palos, Andrew D. L. Nelson, Lee E. Vandivier, Benjamin A. Garcia, Eric Lyons, Mark A. Beilstein, Brian D. Gregory
Publikováno v:
Plant Direct, Vol 4, Iss 7, Pp n/a-n/a (2020)
Abstract After transcription, a messenger RNA (mRNA) is further post‐transcriptionally regulated by several features including RNA secondary structure and covalent RNA modifications (specifically N6‐methyladenosine, m6A). Both RNA secondary struc
Externí odkaz:
https://doaj.org/article/80905837322145e8b608b1550305e467
Autor:
Andrew D. L. Nelson, Evan S. Forsythe, Upendra K. Devisetty, David S. Clausen, Asher K. Haug-Batzell, Ari M. R. Meldrum, Michael R. Frank, Eric Lyons, Mark A. Beilstein
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 6, Iss 9, Pp 2881-2891 (2016)
Transcriptomic analyses from across eukaryotes indicate that most of the genome is transcribed at some point in the developmental trajectory of an organism. One class of these transcripts is termed long intergenic noncoding RNAs (lincRNAs). Recently,
Externí odkaz:
https://doaj.org/article/a4d252df15e847b5bac1b0ed10d2dd05
Autor:
Petr Fajkus, Matej Adámik, Andrew D L Nelson, Agata M Kilar, Michal Franek, Michal Bubeník, Radmila Čapková Frydrychová, Alena Votavová, Eva Sýkorová, Jiří Fajkus, Vratislav Peška
Publikováno v:
Nucleic acids research.
In contrast to the catalytic subunit of telomerase, its RNA subunit (TR) is highly divergent in size, sequence and biogenesis pathways across eukaryotes. Current views on TR evolution assume a common origin of TRs transcribed with RNA polymerase II i
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2512
Comparative genomic and transcriptomic analyses can help prioritize and facilitate the functional analysis of long noncoding RNAs (lncRNAs). Evolinc-II is a bioinformatic pipeline that automates comparative analyses, searching for sequence and struct