Zobrazeno 1 - 10
of 16
pro vyhledávání: '"Andrea R Watson"'
Autor:
William J Watterson, Melikhan Tanyeri, Andrea R Watson, Candace M Cham, Yue Shan, Eugene B Chang, A Murat Eren, Savaş Tay
Publikováno v:
eLife, Vol 9 (2020)
Traditional cultivation approaches in microbiology are labor-intensive, low-throughput, and yield biased sampling of environmental microbes due to ecological and evolutionary factors. New strategies are needed for ample representation of rare taxa an
Externí odkaz:
https://doaj.org/article/ef8cd5832d59451aac795414adbdc03b
Autor:
Andrea R. Watson, Jessika Füssel, Iva Veseli, Johanna Zaal DeLongchamp, Marisela Silva, Florian Trigodet, Karen Lolans, Alon Shaiber, Emily Fogarty, Joseph M. Runde, Christopher Quince, Michael K. Yu, Arda Söylev, Hilary G. Morrison, Sonny T. M. Lee, Dina Kao, David T. Rubin, Bana Jabri, Thomas Louie, A. Murat Eren
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-21 (2023)
Abstract Background Changes in microbial community composition as a function of human health and disease states have sparked remarkable interest in the human gut microbiome. However, establishing reproducible insights into the determinants of microbi
Externí odkaz:
https://doaj.org/article/44bec04531e04bb28a130bfd182cd4c1
Autor:
Brooke L. Weigel, Khashiff K. Miranda, Emily C. Fogarty, Andrea R. Watson, Catherine A. Pfister
Publikováno v:
mSystems, Vol 7, Iss 3 (2022)
ABSTRACT Eukaryotic organisms evolved in a microbial world and often have intimate associations with diverse bacterial groups. Kelp, brown macroalgae in the order Laminariales, play a vital role in coastal ecosystems, yet we know little about the fun
Externí odkaz:
https://doaj.org/article/b268a5204293481982c45fde9065ac23
Autor:
Alon Shaiber, Amy D. Willis, Tom O. Delmont, Simon Roux, Lin-Xing Chen, Abigail C. Schmid, Mahmoud Yousef, Andrea R. Watson, Karen Lolans, Özcan C. Esen, Sonny T. M. Lee, Nora Downey, Hilary G. Morrison, Floyd E. Dewhirst, Jessica L. Mark Welch, A. Murat Eren
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-35 (2020)
Abstract Introduction Microbial residents of the human oral cavity have long been a major focus of microbiology due to their influence on host health and intriguing patterns of site specificity amidst the lack of dispersal limitation. However, the de
Externí odkaz:
https://doaj.org/article/a6fb499471734e1d8c8eb15a4b66f129
Autor:
Julie Reveillaud, Sarah R. Bordenstein, Corinne Cruaud, Alon Shaiber, Özcan C. Esen, Mylène Weill, Patrick Makoundou, Karen Lolans, Andrea R. Watson, Ignace Rakotoarivony, Seth R. Bordenstein, A. Murat Eren
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-11 (2019)
Wolbachia bacteria live within the cells of many insects, including the mosquito Culex pipiens. Here, the authors analyse new and existing Wolbachia metagenomes from C. pipiens mosquitoes and find evidence of a plasmid, which may facilitate genetic m
Externí odkaz:
https://doaj.org/article/0bdec52b221f4a40b7e45db99c7d5565
Autor:
Joseph Runde, Iva Veseli, Emily C Fogarty, Andrea R Watson, Quentin Clayssen, Mahmoud Yosef, Alon Shaiber, Ritu Verma, Christopher Quince, Konstantinos Gerasimidis, David T Rubin, A Murat Eren
Publikováno v:
Journal of Crohn's and Colitis.
Background and Aims Exclusive enteral nutrition [EEN] is a dietary intervention to induce clinical remission in children with active luminal Crohn’s disease [CD]. While changes in the gut microbial communities have been implicated in achieving this
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::19baa7881b5611cc5e4f1811ad41a3df
https://doi.org/10.1093/ecco-jcc/jjad031
https://doi.org/10.1093/ecco-jcc/jjad031
Autor:
Julie Reveillaud, Sarah R. Bordenstein, Corinne Cruaud, Alon Shaiber, Özcan C. Esen, Mylène Weill, Patrick Makoundou, Karen Lolans, Andrea R. Watson, Ignace Rakotoarivony, Seth R. Bordenstein, A. Murat Eren
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-1 (2019)
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
Externí odkaz:
https://doaj.org/article/ef94f630a97d448ebdfbbe95ac21180f
Autor:
Melissa Dsouza, Rajita Menon, Emily Crossette, Shakti K. Bhattarai, Jessica Schneider, Yun-Gi Kim, Shilpa Reddy, Silvia Caballero, Cintia Felix, Louis Cornacchione, Jared Hendrickson, Andrea R. Watson, Samuel S. Minot, Nick Greenfield, Lisa Schopf, Rose Szabady, Juan Patarroyo, William Smith, Pratibha Harrison, Ed J. Kuijper, Ciaran P. Kelly, Bernat Olle, Dmitri Bobilev, Jeffrey L. Silber, Vanni Bucci, Bruce Roberts, Jeremiah Faith, Jason M. Norman
Publikováno v:
Cell Host & Microbe, 30(4), 583-598.e8. CELL PRESS
Manipulation of the gut microbiota via fecal microbiota transplantation (FMT) has shown clinical promise in diseases such as recurrent Clostridioides difficile infection (rCDI). However, the variable nature of this approach makes it challenging to de
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::64d09823d48b803c9f7a60dbf0b671fc
https://hdl.handle.net/1887/3505720
https://hdl.handle.net/1887/3505720
Autor:
Andrea R. Watson, Jessika Füssel, Iva Veseli, Johanna Zaal DeLongchamp, Marisela Silva, Florian Trigodet, Karen Lolans, Alon Shaiber, Emily Fogarty, Joseph M. Runde, Christopher Quince, Michael K. Yu, Arda Söylev, Hilary G. Morrison, Sonny T.M. Lee, Dina Kao, David T. Rubin, Bana Jabri, Thomas Louie, A. Murat Eren
A detailed understanding of gut microbial ecology is essential to engineer effective microbial therapeutics and to model microbial community assembly and succession in health and disease. However, establishing generalizable insights into the function
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3b8816ce351379edee987806eb7ebe58
https://doi.org/10.1101/2021.03.02.433653
https://doi.org/10.1101/2021.03.02.433653
Autor:
Samuel E. Miller, Iva Veseli, Emily Fogarty, Andrea R. Watson, Isaac Fink, Matthew S. Schechter, Antonio Fernandez-Guerra, Mahmoud Yousef, Michael D. Lee, John M. Eppley, Evan Kiefl, Veronika Kivenson, Luke J. McKay, Jarrod J. Scott, A. Murat Eren, Jessika Fuessel, Lois Maignien, Alon Shaiber, Elaina D. Graham, Ryan M Moore, Amy D. Willis, Andreas Sjödin, Sarah L. R. Stevens, Quentin Clayssen, Bryan D. Merrill, Daniel Blankenberg, Elizabeth A. McDaniel, Rika E. Anderson, Jessica N. Pan, Antti Karkman, Özcan C. Esen, Florian Trigodet, Xabier Vázquez-Campos, Tom O. Delmont
Publikováno v:
Nat Microbiol
Nature Microbiology (2058-5276) (Springer Science and Business Media LLC), 2021-01, Vol. 6, N. 1, P. 3-6
Nature Microbiology (2058-5276) (Springer Science and Business Media LLC), 2021-01, Vol. 6, N. 1, P. 3-6
Big data abound in microbiology, but the workflows designed to enable researchers to interpret data can constrain the biological questions that can be asked. Five years after anvi'o was first published, this community-led multi-omics platform is matu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8195345b6912543c672f426dc89368cf
http://hdl.handle.net/10138/332078
http://hdl.handle.net/10138/332078