Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Anand Rampadarath"'
Publikováno v:
F1000Research, Vol 12 (2023)
The Transformer-based approaches to solving natural language processing (NLP) tasks such as BERT and GPT are gaining popularity due to their ability to achieve high performance. These approaches benefit from using enormous data sizes to create pre-tr
Externí odkaz:
https://doaj.org/article/913877e8152e4b9b8e1dfcddc10e08b0
Publikováno v:
Frontiers in Bioinformatics, Vol 3 (2023)
Maximising FAIRness of biosimulation models requires a comprehensive description of model entities such as reactions, variables, and components. The COmputational Modeling in BIology NEtwork (COMBINE) community encourages the use of Resource Descript
Externí odkaz:
https://doaj.org/article/d2447238311a4176833b135507e8b192
Autor:
Yuda Munarko, Dewan M. Sarwar, Anand Rampadarath, Koray Atalag, John H. Gennari, Maxwell L. Neal, David P. Nickerson
Publikováno v:
Frontiers in Physiology, Vol 13 (2022)
Semantic annotation is a crucial step to assure reusability and reproducibility of biosimulation models in biology and physiology. For this purpose, the COmputational Modeling in BIology NEtwork (COMBINE) community recommends the use of the Resource
Externí odkaz:
https://doaj.org/article/4989d70e88c544a7931c06baa0381d7e
Publikováno v:
PLoS Computational Biology, Vol 16, Iss 5, p e1007881 (2020)
Externí odkaz:
https://doaj.org/article/47ea7c0a7727481183e525a19e4a8e52
Maximising FAIRness of biosimulation models requires a comprehensive description of model entities such as reactions, variables, and components. The COmputational Modeling in BIology NEtwork (COMBINE) community encourages the use of RDF with composit
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::86dc83bef1ea06ebdbb98bdcf19029c0
https://doi.org/10.1101/2022.11.22.517475
https://doi.org/10.1101/2022.11.22.517475
Autor:
Anand Rampadarath, Graham M. Donovan
Publikováno v:
Current Opinion in Physiology. 21:17-22
Mathematical modelling has been used in airway and lung physiology with varying degrees of successes. We review recent progress including patient-specific and multi-scale models, ranging from the cellular scale through to tissue and organ scale. We f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d1ceaa59d56032704f5c20bab913432b
https://doi.org/10.1016/j.cophys.2021.03.004
https://doi.org/10.1016/j.cophys.2021.03.004
Autor:
John H. Gennari, Woosub Shin, Maxwell Lewis Neal, Joseph L. Hellerstein, David P. Nickerson, Yuda Munarko, Anand Rampadarath, Herbert M. Sauro
The interests in repurposing and reusing systems biology models have been growing in recent years. Semantic annotations play an important role for this, as they provide crucial information on the meanings and functions of models. However, there are a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::856f0e75ee5c058a4543f2b7442d9f0a
https://doi.org/10.1101/2021.10.09.463757
https://doi.org/10.1101/2021.10.09.463757
Autor:
David P. Nickerson, Maxwell Lewis Neal, John H. Gennari, Ciaran Welsh, Herbert M. Sauro, Anand Rampadarath
Publikováno v:
Bioinformatics
Summary As the number and complexity of biosimulation models grows, so do demands for tools that can help users better understand models and make those models more findable, shareable and reproducible. Consistent model annotation is a step toward the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d7c0ebe42f16969de8edd4d92ddcbda7
https://europepmc.org/articles/PMC8665746/
https://europepmc.org/articles/PMC8665746/
Autor:
David P. Nickerson, Anand Rampadarath
Publikováno v:
Systems Medicine
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2f8a44dd7908c3e8f0bfae31b93271a7
https://doi.org/10.1016/b978-0-12-801238-3.11688-5
https://doi.org/10.1016/b978-0-12-801238-3.11688-5
Publikováno v:
PLoS Computational Biology
PLoS Computational Biology, Vol 16, Iss 5, p e1007881 (2020)
PLoS Computational Biology, Vol 16, Iss 5, p e1007881 (2020)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6d9c2f11017b28339d1e89ab23c89a16
http://europepmc.org/articles/PMC7236972
http://europepmc.org/articles/PMC7236972