Adapter dimer contamination in sRNA‐sequencing datasets predicts sequencing failure and batch effects and hampers extracellular vesicle‐sRNA analysis

Autor: Joaquín J. Maqueda, Alberta Giovanazzi, Ana Mafalda Rocha, Sara Rocha, Isabel Silva, Nadine Saraiva, Nuno Bonito, Joana Carvalho, Luis Maia, Marca H. M. Wauben, Carla Oliveira

Publikováno v: Journal of Extracellular Biology, Vol 2, Iss 6, Pp n/a-n/a (2023)

Abstract Small RNA (sRNA) profiling of Extracellular Vesicles (EVs) by Next‐Generation Sequencing (NGS) often delivers poor outcomes, independently of reagents, platforms or pipelines used, which contributes to poor reproducibility of studies. Here

Externí odkaz: https://doaj.org/article/eec6fab3dbf648a0bf659ade3a044027

Fatigue crack growth analysis of different adhesive systems: Effects of mode mixity and load level

Autor: Alireza Akhavan-Safar, R. Goyal, Ana Mafalda Rocha, Eduardo Marques, Mohamad El-Zein, Ricardo João Camilo Carbas, Lucas F. M. da Silva

Publikováno v: Fatigue & Fracture of Engineering Materials & Structures. 43:330-341

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::3a81f16e40ba3d2fe23efa9540a5c7b2
https://doi.org/10.1111/ffe.13145

Dynamics of a dual SARS-CoV-2 strain co-infection on a prolonged viral shedding COVID-19 case: insights into clinical severity and disease duration

Autor: Maria Salomé Gomes, António Sarmento, Angélica Ramos, Filipa Ceia, Ana Catarina Moreira, Pedro Pablo Palma, Susana Silva, Maria João Cardoso, Verónica Fernandes, Cláudio Silva, Joana Sobrinho-Simões, Diogo Da Silva, Margarida Tavares, Bruno Cavadas, Ana Mafalda Rocha, Ana Cristina Magalhães, Luísa Pereira, Rita Filipe, Nicole Pedro, João Tiago Guimarães

ObjectivesA few molecularly proven SARS-CoV-2 cases of symptomatic reinfection are currently known worldwide, with a resolved first infection followed by a second infection after a 48 to 142-day intervening period. We report a multiple-component stud

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::567512df312be1486e0c3ea44ee68a7a
https://doi.org/10.1101/2020.12.22.20248392

The GHEP–EMPOP collaboration on mtDNA population data—A new resource for forensic casework

Autor: Ana Goios, Greiciane Gaburro Paneto, Cíntia Alves, D.R. Sumita, M.J. Anjos, M.M. de Pancorbo, Regina Maria Barretto Cicarelli, M. Montesino, A. Alonso, M.F. Pinheiro, Bettina Zimmermann, Martin R. Whittle, Sergio Cardoso, Lourdes Prieto, Gabriela Lima, Cintia Fridman, Walther Parson, Ana Mafalda Rocha, Mónica Carvalho, Cristina Albarrán, A Rodrı́guez-Monge

Publikováno v: Forensic Science International. Genetics
Web of Science
Repositório Institucional da UNESP
Universidade Estadual Paulista (UNESP)
instacron:UNESP

Made available in DSpace on 2013-09-27T14:53:31Z (GMT). No. of bitstreams: 1 WOS000288248400016.pdf: 119361 bytes, checksum: 9af8c0ce8fdb208234453f9523e8aa1b (MD5) Previous issue date: 2011-03-01 Made available in DSpace on 2013-09-30T19:24:06Z (GMT)

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a8737e2459b63dbe194c14c2443cfc3a
https://doi.org/10.1016/j.fsigen.2010.10.013

Y-chromosome haplotypes in East Timor (Timor-Leste): Evidences of population differentiation

Autor: Eduardo Ferreira, Ana Mafalda Rocha, Adília Pires, Leonor Gusmão, L. Souto, Francisco Corte-Real, Duarte Nuno Vieira, António Amorim

Publikováno v: Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP

Haplotype frequencies were determined for 346 individuals from East Timor and 3 major ethnolinguistic groups were compared, putting in evidence the need for detailed analyses below the level of the major ethnolinguistic groups. Search of Timorese hap

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c9f139a658bd1df62a77a963baf0f5b7
https://doi.org/10.1016/j.ics.2005.09.081