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pro vyhledávání: '"Amy Wagaman"'
Publikováno v:
International Journal of Educational Development. 52:111-121
This article examines why most of a cohort that attended eighth or ninth grade in 1999 at a middle school in Dalian City, Liaoning Province, China believed by 2012–2013 that children of poorer parents did better academically than children of wealth
Autor:
Amy Wagaman
Publikováno v:
The American Statistician. 70:405-412
Modern students encounter large, messy datasets long before setting foot in our classrooms. Many of these students need to develop skills in exploratory data analysis and multivariate analysis techniques for their jobs after college, but such topics
Publikováno v:
Protein Science. 23:1808-1812
Insights into protein folding rely increasingly on the synergy between experimental and theoretical approaches. Developing successful computational models requires access to experimental data of sufficient quantity and high quality. We compiled foldi
Autor:
Koushik Kasavajhala, Alberto Perez, Justin L. MacCallum, Ken A. Dill, Amy Wagaman, Arijit Roy
Publikováno v:
Proteins: Structure, Function, and Bioinformatics. 82:2671-2680
A large number of methods generate conformational ensembles of biomolecules. Often one structure is selected to be representative of the whole ensemble, usually by clustering and selecting the structure closest to the center of the most populated clu
Publikováno v:
Biophysical Journal. 116:473a
Autor:
Amy Wagaman
Publikováno v:
Statistical Analysis and Data Mining. 6:482-495
Researchers often model folded protein structures as graphs with amino acids as the vertices and edges representing contacts between amino acids. The vertices in these graphs are naturally ordered in the amino acid sequence order. There are many diff
Autor:
Amy Wagaman, Shennon Lu
Publikováno v:
BMC Research Notes
Background There are many different methods for estimating solvent accessible surface area for proteins in their unfolded states. In this article, we compare eight methods, assessing whether or not they lead to different estimates of total accessible
Autor:
Alberto, Perez, Arijit, Roy, Koushik, Kasavajhala, Amy, Wagaman, Ken A, Dill, Justin L, MacCallum
Publikováno v:
Proteins. 82(10)
A large number of methods generate conformational ensembles of biomolecules. Often one structure is selected to be representative of the whole ensemble, usually by clustering and selecting the structure closest to the center of the most populated clu
Autor:
Amy Wagaman
Publikováno v:
Statistical Analysis and Data Mining.
Graphs are building blocks for many statistical techniques. Recent work has addressed graph construction to improve the end result of the associated statistical analysis. In this article, we propose a new method to efficiently construct a k nearest n
Autor:
Sheila S. Jaswal, Amy Wagaman
Publikováno v:
Journal of Theoretical and Computational Chemistry. 13:1450005
Absolute contact order is one of the simplest parameters used to predict protein folding rates. Many variants of contact order (CO) have been applied to highlight different aspects of contact neighborhoods and their relationship to folding. However,