The BioMart community portal: an innovative alternative to large, centralized data repositories

Autor: Byung Woo Han, Jose Manuel Garcia-Manteiga, Alejandro Maass, Jayson Harshbarger, Daniel M. Staines, Zhengyan Kan, Davide Rambaldi, Dong Jin Han, Richard Baldock, Ji Hyun Lee, Merideth Bonierbale, Hadi Quesneville, Anthony Esposito, Thomas Letellier, Jun Wang, Steven Rosanoff, Céline Noirot, Richard D. Hayes, Sarah W. Burge, Anthony J. Brookes, Gabriele Bucci, Giulia Barbiera, Elia Stupka, Olivier Arnaiz, Thomas Maurel, Shen Hu, Olivier Sallou, Emanuela Gadaleta, Jérôme Mariette, Rosalind J. Cutts, Joseph W. Carlson, Damian Smedley, Robert C. Free, James E. Allen, Simon A. Forbes, Kevin R. Stone, Jie Luo, Andrew Blake, Chu Jun Liu, Takatomo Fujisawa, Jon W. Teague, Cristian Perez-Llamas, Rebecca Shepherd, Julio Fernandez-Banet, Raul Cordova, David Goodstein, Shi Jian Zhang, Ken Youens-Clark, Cédric Cabau, José Afonso Guerra-Assunção, Iwan Buetti, Stefania Merella, Delphine Steinbach, Linda Sperling, Robert K. Hastings, Abu Z. Dayem Ullah, Claude Chelala, Erik Dassi, Eduardo Eyras, Sunghoon Kim, Kristian Gray, Dejan Lazarevic, Luca Pandini, Azza M. Mohamed, Doreen Ware, William Spooner, Alex Di Genova, Daniel Lawson, Alessandro Quattrone, Davide Cittaro, Heather Estrella, Rhoda Kinsella, Chuan-Yun Li, Christophe Klopp, Aminah Keliet, Michela Riba, Zhi-Liang Hu, Hideya Kawaji, Arnaud Kerhornou, James M. Reecy, Tim Beck, Charalambos Chrysostomou, François Moreews, Nelson Ndegwa, Arek Kasprzyk, Michael Primig, Claire Hoede, Ibounyamine Nabihoudine, Amonida Zadissa, Paolo Provero, Reinhard Simon, Todd W. Harris, Bernard Haggarty, Lucie N. Hutchins, Marie Wong-Erasmus, Philippe Bardou, Elisa Salas, Lei Kong, Anis Djari, Syed Haider, Steffen Durinck, Mohammad Awedh, Pietro Liò, Amna A. Saddiq, Olivier Collin

Publikováno v: Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2015, 43 (W1), pp.W589-W598. ⟨10.1093/nar/gkv350⟩
Nucleic Acids Research, 2015, 43 (W1), pp.W589-W598. ⟨10.1093/nar/gkv350⟩
Nucleic Acid Research
Artículos CONICYT
CONICYT Chile
instacron:CONICYT
Recercat. Dipósit de la Recerca de Catalunya
instname
Nucleic Acids Research W1 (43), W589-W598. (2015)

International audience; The BioMart Community Portal (www.biomart.org) is a community-driven effort to provide a unified interface to biomedical databases that are distributed worldwide. The portal provides access to numerous database projects suppor

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2e8a78383b99e17d1bdd8b23bcaf5dd7
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01146849

URGI genome annotation system:an integrated system for structural and functional genome annotation

Autor: Joelle Amselem, Michael Alaux, Nathalie Choisne, Nicolas Lapalu, Baptiste Brault, Aminah Keliet, Erik Kimmel, Françoise Alfama, Sandie Arnoux, Marc Bras, Laetitia Brigitte, Olivier Inizan, Véronique Jamilloux, Jonathan Kreplak, Fabrice Legeai, Isabelle Luyten, Cyril Pommier, Sebastien Reboux, Stéphanie Sidibe-Bocs, Marc-Henri Lebrun, Delphine Steinbach, Hadi Quesneville

Publikováno v: 12. Edition du colloque JOBIM : Journées Ouvertes en Biologie, Informatique et Mathématiques
12. Edition du colloque JOBIM : Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2011, Paris, France. 2 p
HAL

The URGI platform (http://urgi.versailles.inra.fr) develops a genome annotation system dedicated to plants and their pathogens. This Integrated System relies on: (i) pipelines for Transposable Elements annotation (REPET) and gene structural and funct

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::4443cb77d374b9440ea1e69638962864
https://hal.archives-ouvertes.fr/hal-01019754