Zobrazeno 1 - 10
of 23
pro vyhledávání: '"Amaryllis Vidalis"'
Autor:
Carolina Bernhardsson, Amaryllis Vidalis, Xi Wang, Douglas G. Scofield, Bastian Schiffthaler, John Baison, Nathaniel R. Street, M. Rosario García-Gil, Pär K. Ingvarsson
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 9, Iss 5, Pp 1623-1632 (2019)
Norway spruce (Picea abies (L.) Karst.) is a conifer species of substanital economic and ecological importance. In common with most conifers, the P. abies genome is very large (∼20 Gbp) and contains a high fraction of repetitive DNA. The current P.
Externí odkaz:
https://doaj.org/article/ae9adcc4b985473b95bc4328958091db
Autor:
Aaron Taudt, David Roquis, Amaryllis Vidalis, René Wardenaar, Frank Johannes, Maria Colomé-Tatché
Publikováno v:
BMC Genomics, Vol 19, Iss 1, Pp 1-14 (2018)
Abstract Background Whole-genome bisulfite sequencing (WGBS) has become the standard method for interrogating plant methylomes at base resolution. However, deep WGBS measurements remain cost prohibitive for large, complex genomes and for population-l
Externí odkaz:
https://doaj.org/article/27fd02213d234fc9a07ad52687d5f37e
Autor:
Amaryllis Vidalis, George C. Adamidis, Georgios Varsamis, Aristotelis C. Papageorgiou, Paraskevi Karanikola, Seraphim Hatziskakis, Ioannis Tsiripidis, Stefanos Boutsios
Publikováno v:
Proceedings of the National Academy of Sciences, India Section B: Biological Sciences. 91:53-61
The size and shape of tree leaves and their variation within the canopy are the result of both physiological plasticity and an overall adaptive strategy against unfavourable environmental conditions. In this study, diversity patterns at leaf morpholo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::efb5ef2b6dedcb6098868a969f13df1f
https://doi.org/10.1007/s40011-020-01201-2
https://doi.org/10.1007/s40011-020-01201-2
Autor:
John, Baison, Amaryllis, Vidalis, Linghua, Zhou, Zhi-Qiang, Chen, Zitong, Li, Mikko J, Sillanpää, Carolina, Bernhardsson, Douglas, Scofield, Nils, Forsberg, Thomas, Grahn, Lars, Olsson, Bo, Karlsson, Harry, Wu, Pär K, Ingvarsson, Sven-Olof, Lundqvist, Totte, Niittylä, M Rosario, García-Gil
Publikováno v:
The Plant Journal
Summary Norway spruce is a boreal forest tree species of significant ecological and economic importance. Hence there is a strong imperative to dissect the genetics underlying important wood quality traits in the species. We performed a functional gen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::1d664dfd0a689a119ad5063c32f5b148
https://pubmed.ncbi.nlm.nih.gov/31166032
https://pubmed.ncbi.nlm.nih.gov/31166032
Autor:
Frank Johannes, Amaryllis Vidalis, Daniel Živković, David Roquis, Aurélien Tellier, René Wardenaar
Publikováno v:
Genome Biology
Despite major progress in dissecting the molecular pathways that control DNA methylation patterns in plants, little is known about the mechanisms that shape plant methylomes over evolutionary time. Drawing on recent intra- and interspecific epigenomi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6ded7a53afa5a386cd2ff0a55816dac7
https://doi.org/10.1186/s13059-017-1176-4
https://doi.org/10.1186/s13059-017-1176-4
Autor:
Amaryllis Vidalis, David Roquis, Maria Colomé-Tatché, Aaron Taudt, René Wardenaar, Frank Johannes
Publikováno v:
BMC Genomics, 19:444. BioMed Central Ltd.
BMC Genomics 19:444 (2018)
BMC Genomics, Vol 19, Iss 1, Pp 1-14 (2018)
BMC Genomics 19:444 (2018)
BMC Genomics, Vol 19, Iss 1, Pp 1-14 (2018)
Background: Whole-genome bisulfite sequencing (WGBS) has become the standard method for interrogating plant methylomes at base resolution. However, deep WGBS measurements remain cost prohibitive for large, complex genomes and for population-level stu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d45768579df56b0b8173b700a07d5c93
https://research.rug.nl/en/publications/fa01412f-4471-4682-994b-1a35c96717ab
https://research.rug.nl/en/publications/fa01412f-4471-4682-994b-1a35c96717ab
Autor:
Amaryllis Vidalis, Nathaniel R. Street, John Baison, M. Rosario Garcia Gil, Pär K. Ingvarsson, Xi Wang, Bastian Schiffthaler, Douglas G. Scofield, Carolina Bernhardsson
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 9, Iss 5, Pp 1623-1632 (2019)
Norway spruce (Picea abies(L.) Karst.) is a conifer species of substanital economic and ecological importance. In common with most conifers, theP. abiesgenome is very large (∼20 Gbp) and contains a high fraction of repetitive DNA. The currentP. abi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7b98fb44ebb6ed059774423bb1ba9c1b
Autor:
Pär K. Ingvarsson, Amaryllis Vidalis, Douglas G. Scofield, Leandro G. Neves, Carolina Bernhardsson, María Rosario García-Gil
Massively parallel sequencing has revolutionized the field of genetics by providing comparatively high-resolution insights into whole genomes for large number of species so far. However, whole-genome resequencing of many conspecific individuals remai
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b0211b639ef7dca88aa9841c280084a2
Publikováno v:
iForest-Biogeosciences and Forestry, Vol 8, Iss 1, Pp 324-332 (2015)
Patterns of fine-scale spatial distribution of multilocus genotypes can provide valuable insights into the biology of forest tree species. Here we tested for the existence of spatial genetic structure (SGS) in a four-oak-species forest with contrasti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::54e150af4e1a20c6de00eff90563f648
https://doi.org/10.3832/ifor1150-007
https://doi.org/10.3832/ifor1150-007
Autor:
Stefania Giacomello, Douglas G. Scofield, Andrea Zuccolo, Claudio Casola, Rosa Maria Cossu, Amaryllis Vidalis
Publikováno v:
Genome Biology and Evolution
The accumulation and removal of transposable elements (TEs) is a major driver of genome size evolution in eukaryotes. In plants, long terminal repeat (LTR) retrotransposons (LTR-RTs) represent the majority of TEs and form most of the nuclear DNA in l
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d866f720fa7036ce73ff2b00dffbfdec
http://hdl.handle.net/11382/519105
http://hdl.handle.net/11382/519105